Thalassospira sp. A40-3: IT893_01680
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Entry
IT893_01680 CDS
T08364
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IT893_01680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thai03019
]
IT893_01680
Messenger RNA biogenesis [BR:
thai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IT893_01680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QPO12259
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All DBs
Position
complement(371133..371660)
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AA seq
175 aa
AA seq
DB search
MAKKSDTPNADKVTADDLPYRPCVGIALFNADGLVWMGNRFGFEGAWQLPQGGIDDGETP
IEAAMRELKEEIGTDKAEIISETPNWLTYDLPEHLIGKAFKGKYRGQKQKWFAMRFTGKD
KHINIDVPDPEFDSWRWNDLATLPDLIVPFKRPVYLQIAAEFHDIPQRIREKGQA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagtccgacaccccgaacgcagacaaagtcacggcagatgatcttccttat
cggccatgcgtcggtattgccctgtttaacgcagacggattggtctggatgggcaaccgt
ttcgggtttgaaggcgcttggcaactgccgcaaggcggcattgatgacggcgaaacgccg
attgaagccgccatgcgcgaactcaaggaagaaatcggcaccgacaaggctgaaatcatt
tccgaaacgcctaactggctgacctatgacctgcccgaacacctgatcggcaaggccttc
aagggtaagtatcgcggccagaaacagaaatggttcgccatgcgctttaccggcaaggac
aaacacatcaatattgatgtcccggatccggaatttgacagttggcgctggaacgatctg
gcaaccctgccggaccttattgtgccgttcaaaaggccggtttatttacaaattgctgcc
gagtttcatgacataccgcaaagaattcgggaaaagggtcaggcataa
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