Thalassospira sp. A40-3: IT893_01860
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Entry
IT893_01860 CDS
T08364
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thai03036
]
IT893_01860 (smc)
Chromosome and associated proteins [BR:
thai03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IT893_01860 (smc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ABC_tran
CCDC39
Motif
Other DBs
NCBI-ProteinID:
QPO12290
LinkDB
All DBs
Position
412037..415570
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AA seq
1177 aa
AA seq
DB search
MVQFKSLKLTGFKSFVDSTDLLVEDGLTGVVGPNGCGKSNLVEALRWVMGETSAKQMRGS
DMSDVIFGGTSSRPARNVAEVSVTLDNSERKAPAMFNDFDMLEVTRRIERGGGSNYRVNG
KDVRARDVQLLFADAATGARSNAMVSQGKIGALIGAKPIQRRLILEEAAGITGLHSRRHE
AELRLKNAEQNMERLEDVLLQLDGQIASLQKQARQAERYRKLSESVRETEALLFHIRWSE
AQKRQEDARELLVAGESAVRDLTSSVTEATTVQAHVAASLPDLRKKEAEAAAALQRLLIE
REGLDKDKAQIETQMGQLRARIQQIDADLAREAELASDAQGALEKLKNEREELREAQGGE
DDALDEAREMASEKALRVEELEADVDQMTNKVAEEEARLKSVQQRLSELNARRARLTERH
DEAVAKLDDIRIEADFSEALEEASMHLEECEELVEQRKLAVEEAEMRLAEMRDREDGLKT
AESDARDALRDAESRKARLTAEIDALESLLRGGDDDKYPGVIENITVQSGFELAMAAALG
EDLDAPDATDAAMHWAAIDPATDDPALPDGVSALAKYVEAPALLNRRLWQIGIVEDEATG
NFLAKNLKVGQRLVSREGALWRWDGYRILAGAELPAAVRLRQRNRLDELRGELEEADAVV
EAASERAEIASENVERLDEEIEAARTAEQEAHRAVRDAENAASSAREEIANIKRDASAIE
SRLQNAEEAEKRAKQDLDELIAEQEELAALPEESSEGLMEIKAELIEKRANLADARADHM
EARSQLERMQSTMSGRRKRLEFVENEIATWNERASGAGERVAELRERQEEARMEIEELEL
KPEEIEERRAILSDRIELSDQTRKDAADELQRAENAQREADINLREAEQKLAEAREGRVR
CEALLEQAEQHRRDLIERIRERVNATPDQLVELGKIDLTKDLPSEGDIEARLQRQTRERE
NLGAVNLRAEVELAEMQEQKDTMVSERDDLIAAIEKLRNGINQLNREARARLKAAFDEVD
KHFQQLFVRLFGGGGAHLMLTDADDPLEAGLEIMASPPGKKLQHLSLLSGGEQALTAVAL
LFAVFLTNPAPICVLDEVDAPLDDANVDRFCKLLEAIGRHANTRFLVITHHRMTMARMNR
LFGVTMAERGVSSLVSVDLHQAEVYSKKEQTELDFTS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttggtccagtttaaatcgctaaagctgacggggttcaaatccttcgtcgattcaacagat
ttattggttgaagacgggctgaccggtgttgtcggcccgaacggctgtggcaaatccaat
cttgtcgaagcattgcgttgggtgatgggcgaaacatcagccaagcagatgcgtggctcg
gacatgtccgacgtgatttttggcggcacatcaagccgtcctgctcgcaacgtcgccgaa
gtatccgtcacccttgataacagcgagcgcaaggcgcccgcgatgttcaatgactttgac
atgcttgaagtcacgcgccgcattgaacgtggcggtggctcgaactatcgcgtcaatggc
aaggatgtgcgtgcgcgtgatgtgcaattgctgtttgccgatgccgcgaccggtgcgcgg
tcaaatgccatggtttcccaaggtaaaattggtgcattgatcggggccaaaccgatccag
cgtcgcctgatccttgaagaggccgccggcattaccggcctgcattcacgccgccacgag
gcggaattgcgccttaagaacgccgaacaaaatatggaacgtcttgaagacgttcttttg
cagcttgatggccagattgcttccctgcaaaaacaggcaagacaggccgaacggtatcgc
aaactttccgaaagtgtccgcgagaccgaggcgctgctgtttcacatccgctggtccgaa
gcccaaaaacgccaggaagacgcacgtgaattactggtcgcgggcgaaagtgcggtacgt
gatctgacctcgtcggtgaccgaggcgaccacggttcaggcccatgtggccgcaagcctg
cccgatcttcgcaaaaaagaggccgaggccgccgccgcccttcaacgtcttttgatcgag
cgcgaaggtcttgataaggacaaggcccagatcgaaacccagatgggccaattacgtgcc
cgtattcagcaaatcgatgccgaccttgcgcgtgaggccgaattggcaagtgatgcgcaa
ggcgcgcttgaaaagctcaagaacgagcgtgaagaactccgcgaggcccaaggcggcgaa
gatgacgcacttgatgaagcccgcgaaatggcatccgaaaaggcgttgcgcgtcgaagaa
ctggaagccgatgttgatcaaatgaccaacaaggtcgccgaggaagaggcacgcctcaaa
tcggtgcaacagcgtctcagtgaactgaatgcccgccgtgcgcgcctgaccgaacgccat
gacgaggctgtcgccaagcttgatgatatccgcattgaggccgacttttccgaggcgctt
gaagaagcaagtatgcatcttgaagagtgtgaggaactggttgaacagcgcaaactggcc
gtcgaagaagcagagatgcgcttggctgaaatgcgtgaccgtgaagatggtctgaaaacc
gccgaaagcgatgcgcgcgatgcattgcgtgatgccgaaagccgcaaggcgcgcctgact
gccgagatcgacgcacttgaaagcctgctgcgcggcggtgacgatgataaatatcccggt
gtgatcgaaaacatcacggttcaaagcggctttgaacttgcgatggcagccgcccttggt
gaggaccttgatgcgccggatgcaaccgatgccgcaatgcattgggccgccattgacccg
gcgaccgatgacccggccctgcccgatggggtgtcggcccttgccaaatatgttgaggca
cccgcacttttgaaccggcgtctgtggcagatcggcattgttgaagacgaagcaaccggc
aacttccttgccaaaaacctcaaggttggtcagcgccttgtgtcgcgcgaaggggcgcta
tggcgttgggatggctatcgtattctggctggggcggaactgcccgccgcggtccgtctg
cgccagcgtaaccgacttgatgaattgcgcggcgagctcgaagaagccgatgcggtggtc
gaagccgcaagcgagcgcgccgaaatcgccagcgaaaatgtcgaacgcctcgatgaagaa
atcgaggcggcccgaacggccgaacaggaagcacaccgcgcggtgcgcgatgctgaaaac
gcggcctcatctgcacgtgaagaaatcgccaatatcaaacgcgatgccagcgctattgaa
agccgccttcagaacgccgaagaggccgaaaaacgcgccaagcaggaccttgatgaactg
attgctgaacaggaagaactcgccgccctgccagaggaaagcagcgagggcctgatggaa
atcaaggccgaactgatcgaaaaacgcgccaatttggccgatgcgcgtgcggaccatatg
gaagcccgcagtcagcttgaacgcatgcaaagcaccatgtcgggccggcgcaagcgcctt
gaattcgttgaaaacgaaattgccacctggaatgaacgtgcatcgggtgccggtgaacgg
gttgccgaattgcgcgaacgccaggaagaggcacgcatggagatcgaggagcttgaactc
aagcccgaagagatcgaagaacgccgtgccattctttctgaccggatcgaactttccgat
caaacccgcaaagatgcggctgatgaattgcagcgcgccgaaaatgcccagcgcgaagcg
gatatcaacctgcgcgaagccgaacagaaactggccgaagcccgtgagggtcgcgtgcgc
tgtgaagcgctgcttgagcaggccgaacagcatcgtcgcgatttgatcgaacgtatccgc
gaacgtgtcaatgcgacgccggatcagttggttgagcttggcaagattgacctgaccaag
gacctgccaagcgaaggcgacatcgaagcccgtctgcaacgccagacccgcgaacgtgaa
aaccttggtgcggttaacctgcgtgccgaggtcgaactggccgagatgcaggaacagaaa
gacaccatggtgtctgaacgcgatgatttgattgctgccattgaaaaactgcgcaatggc
atcaatcagctcaaccgcgaagcccgtgcgcgtttgaaagcggcctttgacgaggtggac
aagcacttccagcaattgtttgtccgcctgtttggtggcggcggtgcgcacctgatgctg
actgatgcagatgatccgcttgaagccggacttgaaatcatggcatccccgccgggtaaa
aagcttcagcatctgtcgcttctgtcaggtggggaacaggcgctgactgctgtggcgctt
ctatttgcggtcttcctgaccaatccggccccgatctgcgtccttgacgaggtcgatgcc
ccgcttgatgacgccaacgttgaccgcttctgcaagctgttggaggccattggccgtcat
gctaatacccgcttcctggtcatcacccaccaccgtatgaccatggcccgcatgaaccgt
ctgtttggggtgaccatggccgagcgcggtgtgtcttcgctggtatcggtcgacctgcat
caggcagaagtctattccaaaaaagaacagaccgagctcgatttcaccagctaa
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