Thalassospira sp. A40-3: IT893_02490
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Entry
IT893_02490 CDS
T08364
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
thai
Thalassospira sp. A40-3
Pathway
thai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT893_02490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thai02000
]
IT893_02490
Transporters [BR:
thai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IT893_02490
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Stonin2_N
Motif
Other DBs
NCBI-ProteinID:
QPO12410
LinkDB
All DBs
Position
complement(552239..553399)
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AA seq
386 aa
AA seq
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MKSLLKSGTSVMVVLAFAASQAAAADMMTELGTPEGSVNIVAWPGYIERGETDANFDWVT
AFEKETGCAVNVKTANTSDEMVALMNEGGFDLVTASGDASLRMIAGKRVQPINTDLIPSW
NTVDDRLKSAPWHTVDGVHYGTPYQWGPNVLMYNTDAFAEAPKSWNVVFEEMTLADGKSN
KGRVQAYDGPIHIADAAQYLMAHNPELGIKSPYELNADQYAAALDLLRGQRELVSRYWHD
AFIQMDDFKNEGVVASGSWPFQVNLLKSEGLPIASTIPEEGVTGWADTTMLHAEAENPTC
AYLWMEHSLSPKVQGDLAAWFGSNPAVPAACTGNALLGDEGCATNGFDDFDRVSFWQTPV
SKCESQGECVPYYRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactattgaaatcaggcacgtccgtgatggtcgtgcttgcctttgccgccagt
caggcggctgccgctgacatgatgaccgaacttggcacaccggaaggttccgtgaatatc
gttgcctggccgggctatatcgagcgcggcgaaacggatgccaattttgactgggtaacc
gcctttgaaaaggaaaccggatgcgcggtgaatgtcaaaaccgccaacacatccgatgaa
atggtcgcgctgatgaacgaaggcggctttgatcttgtcaccgcatcgggcgatgcgtcg
ctgcgcatgattgccggcaaacgcgttcagccgatcaataccgacctgatcccaagctgg
aacaccgtcgatgaccgcctgaaaagcgcgccatggcacacggttgacggcgtgcattac
gggacgccctatcagtggggtccgaacgttctgatgtacaataccgacgccttcgccgaa
gcaccgaaaagctggaatgtcgtgttcgaggaaatgacccttgctgatggcaaatcgaac
aagggtcgcgttcaggcctatgacggaccgatccacatcgccgacgccgcgcaatatctg
atggcgcacaaccccgaacttggcatcaaaagcccctatgagctgaatgccgatcaatat
gccgcagcacttgatctgctgcgcgggcagcgtgaactggtgtcacggtactggcatgat
gccttcatccagatggatgatttcaagaacgaaggcgttgtcgcatccggttcctggccg
ttccaggtcaaccttctgaaatcggaaggccttccgattgcatcgacgatccccgaagaa
ggggttaccggctgggctgataccaccatgctccatgccgaagctgaaaacccgacctgt
gcctatctctggatggaacattccctgtctccgaaagttcagggcgaccttgcggcatgg
tttggttccaacccggctgttccggcagcctgcaccggcaatgccctgttgggcgatgaa
ggttgcgccaccaacggctttgatgatttcgaccgtgtcagcttctggcagaccccggtt
tcgaaatgcgaaagccagggtgaatgcgtgccttattatcgttgggtttccgactatatc
ggcgtgattggcggccgctaa
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