Thalassospira sp. A40-3: IT893_05180
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Entry
IT893_05180 CDS
T08364
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thai
Thalassospira sp. A40-3
Pathway
thai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT893_05180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thai02000
]
IT893_05180
Transporters [BR:
thai02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IT893_05180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF459
Motif
Other DBs
NCBI-ProteinID:
QPO12920
LinkDB
All DBs
Position
1150385..1151953
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AA seq
522 aa
AA seq
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MKSLFKGVLAAATLAVSAIGFGPAEAQTPPGVLVVGQIAEPKSLDPAAVTAVNDFRILMN
VYDGLVRYKDGTLEAEPALAESWTISDDGTVYTFNLRDDVTFHDGTPFNAEAVKYNFDRM
LDENHPEHDTGPFPLAFFFSAVEEVEVVDDLTVKFQLNAPYAPFLSNLAYPTGLIVSPTA
VAENGADFGRSPVGTGPFKFAEWESNAKVVVVRNDDYWEDPAKLEAVVFRPITDANTRVA
ELMAGGIDLMVEVPPDSLTQLAGDDNFSVYEQAGPHLWFLILNLKEGPFQDKKVRQAINY
AIDKKALVENVLQGTAEIASGPTPPAFAWAYNEQLQPYPHDVEKAKQLIKEAGAEGAEVT
FYVTEGGSGMLDPVPMGAAIQADLAQVGLTVAIETYEWNTFLGKVNPGLEGKADMAEMAW
MTNDPDTLPYLALRTDAWPDKGGFNSGYYSNPEVDKLLEAARSSTDQAERAKLYREMQEI
VYDDAPWAFIANWKQNAVSSTLVDGFKLQPSFFLLLDDVVKN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctgtttaaaggggtgcttgcagcagcaacccttgcggtttccgcaatcggt
ttcggcccggccgaagcccagacgccaccgggtgtcctggtggtcggtcagattgcagag
cccaaatcacttgatccggcggcagtgaccgccgtgaatgatttccgcattctgatgaat
gtttatgatggtctggtccgctacaaggacggcacgctcgaagccgagcccgcccttgca
gaaagctggacgatctcagatgacggcacggtttacactttcaatctgcgggatgatgtg
accttccatgacggcacaccattcaatgccgaggcggtcaaatacaattttgaccgcatg
cttgatgaaaatcatcctgaacatgacaccggtcctttcccgcttgccttcttctttagc
gcggtggaagaggtcgaagtcgtcgatgacctgaccgtcaagttccagctgaacgcacct
tatgcgccgttcctgtccaaccttgcctatccgaccggcctgattgtttcgccgacggct
gttgcggaaaacggggcagactttggccgcagcccggtgggcaccggtccgttcaaattt
gccgaatgggaaagcaacgccaaggtggttgtcgtacgcaacgacgattactgggaagat
cctgccaagcttgaagcagttgtgttccgtccgatcacggatgccaacacccgtgtggcc
gaattgatggctggtggtattgacctgatggtcgaagtcccgccagacagcctgacccag
cttgcgggcgacgataacttcagcgtctatgaacaggcaggcccgcacttgtggttcctg
atcctcaatctgaaagaaggcccgttccaggacaagaaagtccgtcaggcgatcaactat
gcgattgataaaaaggcattggtggaaaacgtgcttcagggcacggctgaaatcgcatcg
ggtccgaccccgcctgcctttgcatgggcttataacgaacagctccagccttatccgcat
gatgtggaaaaggccaaacaactgatcaaggaagctggcgccgaaggggcagaagttacc
ttctatgtcaccgaaggtggctcgggtatgcttgatccggtcccgatgggggcagccatt
caggctgatctggcacaggttggcttgacggttgcaattgagacctacgaatggaacacc
ttccttggcaaggtgaacccgggtcttgaaggcaaggcggacatggcagaaatggcatgg
atgaccaacgatcccgacaccctgccatatctggcgctgcgcaccgatgcgtggccggac
aagggtggcttcaattcggggtactattccaacccggaagtggacaaacttcttgaagca
gcccgctcttcgaccgatcaggccgaacgtgccaagctgtatcgcgaaatgcaggaaatc
gtctatgacgatgcgccatgggcctttatcgcaaactggaaacagaatgcggtttcaagc
acgctggtggatggtttcaaattgcagccgtccttcttcctgctgcttgatgatgtcgta
aagaactga
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