Thalassospira sp. A40-3: IT893_05885
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Entry
IT893_05885 CDS
T08364
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai00521
Streptomycin biosynthesis
thai00523
Polyketide sugar unit biosynthesis
thai00525
Acarbose and validamycin biosynthesis
thai00541
Biosynthesis of various nucleotide sugars
thai01100
Metabolic pathways
thai01110
Biosynthesis of secondary metabolites
thai01250
Biosynthesis of nucleotide sugars
Module
thai_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IT893_05885 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IT893_05885 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IT893_05885 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IT893_05885 (rfbB)
00525 Acarbose and validamycin biosynthesis
IT893_05885 (rfbB)
Enzymes [BR:
thai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IT893_05885 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QPO13045
LinkDB
All DBs
Position
1315326..1316396
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AA seq
356 aa
AA seq
DB search
MKVIVTGGAGFIGSAVCRLMTGLKGYEVLNIDKLTYAGDLRTLASISARDNYHFAHQDIC
NRDAIAKLFDEFQPDAVMHLAAESHVDRSIDGPADFIQTNVVGTFTLLDVARAYFEKLSA
GRRATFRFHHISTDEVYGSLGSEGLFTEETAYAPTSPYSASKASSDHLVQAWHHTYGLPI
VISNCSNNYGPFQFPEKLIPLMVLNLLHGRKLPVYGEGLNTRDWLHVEDHAEALVKILTE
GRIGEKYNVGGCNELTNIDVVKRIFDTVRAIIPDIAFDSFDGAVTYVKDRPGHDWRYAID
PTKMQNELGWKPKYDFETGLRQTIEWYVNNRAWWEPILQNKYAGERLGSAKGQADA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcgtgacgggcggtgcaggttttatcgggtctgctgtttgtcggctgatg
accgggttgaagggctatgaagtccttaatatcgataaactgacctatgcgggtgatctg
cggacgttggcgtcaatttccgcacgcgataactaccattttgcccatcaggatatctgc
aaccgggacgccattgccaaactgtttgatgaattccagcccgatgcggtgatgcatctg
gcggcggaaagtcatgttgatcgttcgatcgacggaccggctgatttcattcagaccaat
gtggttggcacctttaccctgcttgacgtcgcacgcgcctattttgagaagctgtcggca
ggcaggcgagcgacattccggttccaccatatttcgacagacgaggtttatggatcgctt
ggcagcgaagggctgttcaccgaagaaacggcttatgcgccgacctcaccttattctgcc
agcaaggcaagttcggatcatctggtgcaggcgtggcaccatacctatggattgcccatc
gtcatcagcaattgttccaacaattacgggccgtttcagttcccggaaaagctgatcccg
ttgatggtgctgaacctgctgcatggcaggaagcttccggtttatggcgagggtttgaat
acgcgcgactggctgcatgttgaagatcatgcagaggcactggtcaagatcctgaccgaa
ggccgcattggcgagaaatacaatgttggcggctgtaacgaactgaccaatatcgatgtc
gtgaaacggatattcgatacagtccgcgcgatcataccggacatcgcattcgacagtttt
gatggcgcggtgacatatgtaaaggaccgtcccggtcacgattggcgctatgccatcgat
ccaaccaaaatgcagaatgagttgggttggaagccgaaatacgatttcgaaaccggcctg
cggcaaaccattgagtggtatgtgaacaatcgcgcatggtgggagccgattttacagaac
aaatatgccggagaacgtctgggaagtgccaaggggcaagccgatgcctag
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