Thalassospira sp. A40-3: IT893_08060
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Entry
IT893_08060 CDS
T08364
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai00010
Glycolysis / Gluconeogenesis
thai00020
Citrate cycle (TCA cycle)
thai00260
Glycine, serine and threonine metabolism
thai00280
Valine, leucine and isoleucine degradation
thai00310
Lysine degradation
thai00380
Tryptophan metabolism
thai00620
Pyruvate metabolism
thai00630
Glyoxylate and dicarboxylate metabolism
thai00640
Propanoate metabolism
thai00670
One carbon pool by folate
thai00785
Lipoic acid metabolism
thai01100
Metabolic pathways
thai01110
Biosynthesis of secondary metabolites
thai01120
Microbial metabolism in diverse environments
thai01200
Carbon metabolism
thai01210
2-Oxocarboxylic acid metabolism
thai01240
Biosynthesis of cofactors
Module
thai_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thai_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thai_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
thai_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IT893_08060 (lpdA)
00020 Citrate cycle (TCA cycle)
IT893_08060 (lpdA)
00620 Pyruvate metabolism
IT893_08060 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
IT893_08060 (lpdA)
00640 Propanoate metabolism
IT893_08060 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IT893_08060 (lpdA)
00280 Valine, leucine and isoleucine degradation
IT893_08060 (lpdA)
00310 Lysine degradation
IT893_08060 (lpdA)
00380 Tryptophan metabolism
IT893_08060 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IT893_08060 (lpdA)
00670 One carbon pool by folate
IT893_08060 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thai04147
]
IT893_08060 (lpdA)
Enzymes [BR:
thai01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
IT893_08060 (lpdA)
Exosome [BR:
thai04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
IT893_08060 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
DAO
FAD_oxidored
NAD_binding_8
HI0933_like
GIDA
FAD_binding_3
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
XdhC_C
Amino_oxidase
AlaDh_PNT_C
3HCDH_N
DUF4878
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QPO13445
LinkDB
All DBs
Position
1801527..1802924
Genome browser
AA seq
465 aa
AA seq
DB search
MADNNFDVIVIGAGPGGYVTAIRAAQLGLKTAVVEREHVGGICLNWGCIPTKALLRSAEV
YRNMHHAKDYGLSCEKPSFDLDAVIQRSRGVSKQLAGGVGHLLKKNKVTVINGEAKFDGP
KKIVVEGKDKGTYTAKNYIIATGARARSLPGLEADGKVVWDYKKAMTPDKMPKSLVVVGS
GAIGIEFASFYHTMGADVTVVEIMPQIMPVEDKEVAGLAQKMMTKDGMKILTEAKVANLK
RNSDNVVVTVETKDGKKQELTVDRVISAVGVIGNTEGLGLETTKVKVDRNVIDTNEYSAT
AEPGIYAIGDVAGPPMLAHKAEHEGVICIEKIAGVKGVHPLDPRKIPGCTYCHPQVASVG
LTEAKAKDAGYEVKVGKFPFIGNGKAVALGEAEGLVKTVFDAKTGELLGAHMVGAEVTEL
IQGFVVAMGLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRAIHF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaatttcgacgtaatcgtgattggcgcaggcccgggtggttatgtaact
gcaatccgtgcggcccagcttggcctgaaaacggctgttgtcgaacgtgaacatgttggc
ggtatttgcctgaactggggctgcatcccgaccaaggcgttgctgcgttcggccgaagtt
tatcgcaacatgcaccacgcaaaggattatggcctttcctgtgaaaagccgtcctttgat
ctggatgcggtgatccagcgttcgcgcggtgtgtccaagcagcttgccggtggtgttggt
catttgctgaaaaagaacaaggtgaccgtgatcaacggtgaagccaagttcgacggcccg
aaaaagatcgtggtcgaaggcaaggacaagggtacctataccgcgaagaattatatcatc
gcgaccggtgcgcgcgcccgttcactgccgggtcttgaggccgacggcaaggtggtttgg
gattacaaaaaggcgatgacgcctgacaagatgcccaaaagccttgttgtggtgggttcc
ggtgccatcgggatcgagtttgccagcttctatcacaccatgggtgcggatgtgaccgtg
gtggaaatcatgccgcagatcatgccggttgaagacaaggaagtcgcaggcctggcgcag
aagatgatgaccaaggacgggatgaagatcctgaccgaagccaaggtcgcgaaccttaag
cgcaattccgataacgttgttgtcacggttgaaaccaaggacggcaagaaacaggaattg
accgttgatcgcgtgatttcggccgttggtgtgatcggtaataccgaaggtcttggtctt
gaaaccaccaaggtcaaggtcgatcgcaacgtgatcgataccaacgaatattcggcaact
gcggaaccgggcatctatgccattggtgatgttgccggtccgccgatgctcgcgcacaag
gccgagcacgaaggtgtcatctgcattgaaaagattgccggtgtcaaaggcgttcatccg
cttgatccgcgcaagatcccgggctgcacctattgccatccgcaggtcgcaagtgtcggt
ctgaccgaagccaaggccaaagatgccggttatgaagtcaaggttggcaagttcccgttc
attggcaatggcaaggcggtcgcccttggcgaggcagaaggtctggtcaagaccgtgttt
gatgccaagaccggtgaattgcttggcgcgcacatggttggtgccgaagtgaccgagctg
atccagggctttgtggttgcgatgggtcttgaaacgaccgaggaagatctcatgcatacg
gtcttcccgcatccgacgctttcggaaatgatgcatgagtcggtccttgacgcctatggc
cgtgcgatccacttctag
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