KEGG   Thalassospira sp. A40-3: IT893_08060
Entry
IT893_08060       CDS       T08364                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
thai  Thalassospira sp. A40-3
Pathway
thai00010  Glycolysis / Gluconeogenesis
thai00020  Citrate cycle (TCA cycle)
thai00260  Glycine, serine and threonine metabolism
thai00280  Valine, leucine and isoleucine degradation
thai00310  Lysine degradation
thai00380  Tryptophan metabolism
thai00620  Pyruvate metabolism
thai00630  Glyoxylate and dicarboxylate metabolism
thai00640  Propanoate metabolism
thai00670  One carbon pool by folate
thai00785  Lipoic acid metabolism
thai01100  Metabolic pathways
thai01110  Biosynthesis of secondary metabolites
thai01120  Microbial metabolism in diverse environments
thai01200  Carbon metabolism
thai01210  2-Oxocarboxylic acid metabolism
thai01240  Biosynthesis of cofactors
Module
thai_M00009  Citrate cycle (TCA cycle, Krebs cycle)
thai_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thai_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
thai_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:thai00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    IT893_08060 (lpdA)
   00020 Citrate cycle (TCA cycle)
    IT893_08060 (lpdA)
   00620 Pyruvate metabolism
    IT893_08060 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    IT893_08060 (lpdA)
   00640 Propanoate metabolism
    IT893_08060 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IT893_08060 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    IT893_08060 (lpdA)
   00310 Lysine degradation
    IT893_08060 (lpdA)
   00380 Tryptophan metabolism
    IT893_08060 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    IT893_08060 (lpdA)
   00670 One carbon pool by folate
    IT893_08060 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:thai04147]
    IT893_08060 (lpdA)
Enzymes [BR:thai01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     IT893_08060 (lpdA)
Exosome [BR:thai04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   IT893_08060 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 DAO FAD_oxidored NAD_binding_8 HI0933_like GIDA FAD_binding_3 Lys_Orn_oxgnase 2-Hacid_dh_C Thi4 XdhC_C Amino_oxidase AlaDh_PNT_C 3HCDH_N DUF4878 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QPO13445
LinkDB
Position
1801527..1802924
AA seq 465 aa
MADNNFDVIVIGAGPGGYVTAIRAAQLGLKTAVVEREHVGGICLNWGCIPTKALLRSAEV
YRNMHHAKDYGLSCEKPSFDLDAVIQRSRGVSKQLAGGVGHLLKKNKVTVINGEAKFDGP
KKIVVEGKDKGTYTAKNYIIATGARARSLPGLEADGKVVWDYKKAMTPDKMPKSLVVVGS
GAIGIEFASFYHTMGADVTVVEIMPQIMPVEDKEVAGLAQKMMTKDGMKILTEAKVANLK
RNSDNVVVTVETKDGKKQELTVDRVISAVGVIGNTEGLGLETTKVKVDRNVIDTNEYSAT
AEPGIYAIGDVAGPPMLAHKAEHEGVICIEKIAGVKGVHPLDPRKIPGCTYCHPQVASVG
LTEAKAKDAGYEVKVGKFPFIGNGKAVALGEAEGLVKTVFDAKTGELLGAHMVGAEVTEL
IQGFVVAMGLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRAIHF
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcggataacaatttcgacgtaatcgtgattggcgcaggcccgggtggttatgtaact
gcaatccgtgcggcccagcttggcctgaaaacggctgttgtcgaacgtgaacatgttggc
ggtatttgcctgaactggggctgcatcccgaccaaggcgttgctgcgttcggccgaagtt
tatcgcaacatgcaccacgcaaaggattatggcctttcctgtgaaaagccgtcctttgat
ctggatgcggtgatccagcgttcgcgcggtgtgtccaagcagcttgccggtggtgttggt
catttgctgaaaaagaacaaggtgaccgtgatcaacggtgaagccaagttcgacggcccg
aaaaagatcgtggtcgaaggcaaggacaagggtacctataccgcgaagaattatatcatc
gcgaccggtgcgcgcgcccgttcactgccgggtcttgaggccgacggcaaggtggtttgg
gattacaaaaaggcgatgacgcctgacaagatgcccaaaagccttgttgtggtgggttcc
ggtgccatcgggatcgagtttgccagcttctatcacaccatgggtgcggatgtgaccgtg
gtggaaatcatgccgcagatcatgccggttgaagacaaggaagtcgcaggcctggcgcag
aagatgatgaccaaggacgggatgaagatcctgaccgaagccaaggtcgcgaaccttaag
cgcaattccgataacgttgttgtcacggttgaaaccaaggacggcaagaaacaggaattg
accgttgatcgcgtgatttcggccgttggtgtgatcggtaataccgaaggtcttggtctt
gaaaccaccaaggtcaaggtcgatcgcaacgtgatcgataccaacgaatattcggcaact
gcggaaccgggcatctatgccattggtgatgttgccggtccgccgatgctcgcgcacaag
gccgagcacgaaggtgtcatctgcattgaaaagattgccggtgtcaaaggcgttcatccg
cttgatccgcgcaagatcccgggctgcacctattgccatccgcaggtcgcaagtgtcggt
ctgaccgaagccaaggccaaagatgccggttatgaagtcaaggttggcaagttcccgttc
attggcaatggcaaggcggtcgcccttggcgaggcagaaggtctggtcaagaccgtgttt
gatgccaagaccggtgaattgcttggcgcgcacatggttggtgccgaagtgaccgagctg
atccagggctttgtggttgcgatgggtcttgaaacgaccgaggaagatctcatgcatacg
gtcttcccgcatccgacgctttcggaaatgatgcatgagtcggtccttgacgcctatggc
cgtgcgatccacttctag

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