Thalassospira sp. A40-3: IT893_08100
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Entry
IT893_08100 CDS
T08364
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thai01011
]
IT893_08100
Enzymes [BR:
thai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
IT893_08100
Peptidoglycan biosynthesis and degradation proteins [BR:
thai01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
IT893_08100
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Phage_lysozyme2
DUF6260
Motif
Other DBs
NCBI-ProteinID:
QPO13451
LinkDB
All DBs
Position
complement(1808486..1810522)
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AA seq
678 aa
AA seq
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MAQASFRKISICALALGFSILIPGSYQVQAATNEDNVLQTQPPSPLYSAVSRARLNAFLD
AVEDGKTDIFEQLLTNFDDPLLQKAAEWMLLTAPNSGHSFEEITAFIDAHPKWPNQALLR
QRAEEAMTDAVPDDEILAWFKRSAPVTADGATRQIKALLGAGQESAAIALVRHSWINENF
GSGQERRFLDRYGEYIDQETHQQRLDRLLWEGRLTTAARMMKYVSDDYRRLAEARAALRA
MSGGVDGAINRVPEKYRDDPGLIYERVRWRRKKDRDQDARDLLLSQANDLAYISIRPQYW
WLEKAILARRALQKGHITDAYRLVANHGQVDPGDIAEAEWYAGWIALEFLGDADIALTHF
QNLYDVVQYPISLSRGSYWAGRANEALGDQKRAKEWYAIAAEHAHTFYGQLAIDKLGSKP
SYSVEQPVPTAEQRAEFEAQELTQVVRKLGAMGLGNIIRPFIMALVYEHDEPEYLAMATD
LAREYGRTDLGILAAKRSIRTGSGYLDAAYPIHEQVPLGRAPDPALVHAIMRQESLFNPQ
AVSSAGARGLMQLMPATAKRMAQSLKLDYDTDRLIEDPSFNIAVGRAYLSRLLDRWDGQE
VLTIASYNAGPTRVRQWINEYGDPRDPDVDLVDWIEMIPYSETRNYVQRVMEGTYVYRRR
FARDEIAMGQSDAVSNAE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcgtctttccgcaagatttcgatctgcgcattggcactgggcttttcgatc
ttgataccaggcagttatcaggtgcaggccgcaacgaatgaagacaacgttcttcagacg
cagccgccctcgccgctgtattctgctgtcagccgggcgcgcctgaacgcctttctggac
gcggttgaagatggcaagaccgacattttcgaacaactcctgaccaattttgatgatccc
ctgctgcaaaaggcagcggaatggatgctgctgaccgcccccaattccggtcacagcttc
gaagaaatcaccgccttcatcgatgcccatccgaaatggcccaatcaggcgctgctaaga
cagcgcgccgaagaagccatgaccgatgccgtgcccgatgacgaaattctggcatggttc
aaacgatctgcaccggtgaccgctgatggtgccacccgccagatcaaggcgttgttgggt
gctggacaggaatcggcggccatcgcactggtccgccacagctggattaacgagaatttc
ggcagcggtcaggaacgccgcttccttgatcgctacggtgaatatattgatcaggaaacc
caccaacagcgccttgatcgcctgttatgggaaggtcgcctaacgacggccgcgcgcatg
atgaaatatgttagcgacgattaccgtcgcctggccgaggcccgcgccgccctgcgcgcc
atgagtggcggtgttgacggcgcgatcaatcgtgttccggaaaaataccgcgatgatccc
ggcctgatttacgaacgtgtgcgctggcgccgcaagaaggaccgtgatcaggatgcccgt
gatcttctgctctcgcaggccaatgacctcgcctatatctcgatccggccgcaatactgg
tggctggaaaaggccattctggcccgccgcgccctgcaaaagggccatatcaccgatgca
taccgtctggtcgctaaccatgggcaggttgatccgggcgatatcgccgaggccgaatgg
tatgcgggttggatcgcgcttgaatttttgggtgatgccgacatcgcgctgacccatttc
cagaacctttatgatgtcgttcaatacccgatcagcctgtcgcgcggctcttactgggcc
gggcgcgcaaacgaggcgcttggcgatcagaaacgcgccaaggaatggtatgcaatcgcg
gctgaacatgcccacaccttctatgggcagcttgccatcgacaaactgggcagcaagcca
tcctattcggttgaacagccggtcccgaccgccgaacaacgcgccgaattcgaagcacag
gaactgacccaggttgtccgcaagctcggcgcgatgggccttggcaatatcatccgtcct
ttcatcatggcactggtttacgaacatgatgaaccagaatacctcgccatggcgacagat
ctggcgcgcgaatatggccgcaccgatctgggtattctggccgccaaacgcagcatccgc
actggcagtggctatcttgatgccgcctacccgatccatgaacaggttccgttgggccgt
gccccggatccggcgctggtccatgccatcatgcgtcaggaaagcctgtttaacccgcag
gcggtctcgtctgctggcgcacgtggtctgatgcagttgatgccggccacggcaaagcgc
atggcacagtcgctcaagcttgattacgacaccgatcgcctgatcgaggatccgtccttc
aacatcgcagttggccgtgcatatctcagccgccttcttgatcgttgggatggtcaggaa
gtcctgacgatcgccagttacaatgccgggccgacccgtgtgcgccaatggatcaacgaa
tatggcgatccgcgcgacccggatgtcgatctggtcgactggatcgaaatgatcccctat
agcgaaacccgaaactacgttcagcgtgtgatggaaggaacttatgtctatcgccggcgt
tttgcccgggacgagatcgcaatgggtcaaagcgacgcggtgagcaacgcagaataa
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