KEGG   Thalassospira sp. A40-3: IT893_08480
Entry
IT893_08480       CDS       T08364                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
thai  Thalassospira sp. A40-3
Pathway
thai02020  Two-component system
Brite
KEGG Orthology (KO) [BR:thai00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IT893_08480
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:thai02022]
    IT893_08480
Two-component system [BR:thai02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   IT893_08480
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase NB-ARC AAA AAA_19 FleQ AAA_22 B12-binding nSTAND6 AAA_2 TSNR_N AAA_30 AAA_33 RNA12 AAA_14 MCM NACHT TIP49
Other DBs
NCBI-ProteinID: QPO13524
LinkDB
Position
1881646..1883025
AA seq 459 aa
MAHDILIVDDEEDIRALISGILEDEGYTTRQAGSSQGALSEVAARRPSLVVLDIWMDESD
HDGIETLKLIKREHSEVPVVMISGHGNIETALEASRIGAYDFIEKPFNTDRLLMVVERAI
DDARLRRENRELTLRAGGDTELVGKSSVLNNLRQSAERVARTGSRILIHGPAGSGKEVVA
RLIHQKSARAEAPFVVLNCANISPDTMEESLFGAVATSDREARTGVLELAHGGTLLLDEV
ADMPLETQGKIVRVLQDQTFERVGGSVPVNVDVRVIATTARDLEQRIAEQKFRQDLYYRL
NVVPLEVPSLQQRREDIPMLAEMFLDRYADATGLPKRKLSPEAMATLHAYDWPGNVRQLR
NVIERLMIMAPDDDDKVDLISGKMLPSELFSDVPTSLSFDKTSEIMALPLREAREMFEKE
YLQTQIDRFGGNISKTASFVGMERSALHRKLKSLGVNGQ
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcgcacgacattcttattgtcgacgatgaagaagatatccgggctctgatatcaggc
atcctcgaggacgagggttatacaacccgtcaggcaggatcaagccagggcgcgctgtca
gaggttgccgcccgtcggccgagccttgtggtgcttgatatctggatggatgaaagcgat
cacgatggcatcgagacgcttaagctgatcaagcgcgagcacagcgaagtcccggtcgtg
atgatttccggtcacggtaatattgaaacggcactcgaagcgtcgcgcatcggtgcctat
gacttcatcgaaaaaccgttcaatactgaccgccttttgatggtggtcgaacgcgccatt
gatgatgcgcgcctgcgccgtgaaaaccgtgaactgaccttgcgggccggcggcgatacc
gaactcgttggcaaatcatcggttttgaacaacctgcgccagtcggccgaacgggttgcg
cgtaccggcagccgcattctgatccatgggccggccggatcgggcaaggaagttgtcgcg
cgcctgatccatcagaaatccgcccgtgccgaggcgccgtttgtcgtgctgaactgtgcc
aatatttcgcccgacaccatggaagaatcgctgtttggtgcggttgcgacttcggatcgt
gaggcgcgcacaggcgtgcttgaattggcccatggcgggaccttgttgcttgatgaagtg
gccgatatgccgcttgaaacccagggcaagattgtccgggttttgcaggatcaaacgttt
gaacgcgttggcggatcggttccggtcaatgttgatgtgcgcgttatcgcaacaactgca
cgcgaccttgaacaacgcattgccgagcagaaattccgccaggacctttattaccgcctc
aatgttgtgccgcttgaagtaccatccttgcagcagcgtcgcgaagatattccgatgttg
gcggaaatgttccttgatcgttatgccgatgcgacggggcttcccaaacggaaactttcg
cccgaggcaatggcaaccctgcatgcttatgattggccgggcaatgtgcgccagttgcgc
aatgtcatcgaaagattgatgatcatggcgcccgatgatgacgacaaggtggatctgatc
agtggtaaaatgctgccatcagagctgttttctgacgtgccgacgtcgctaagttttgac
aagaccagtgaaatcatggcattgccgctccgcgaagcgcgggagatgtttgaaaaagaa
tatctccagacacagatcgaccgttttggcgggaatatctccaaaacggcaagctttgtc
ggcatggaacgctcagccttgcatcgcaagctgaaaagccttggtgtgaacggtcaataa

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