Thalassospira sp. A40-3: IT893_08935
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Entry
IT893_08935 CDS
T08364
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thai03021
]
IT893_08935 (rpoH)
Transcription machinery [BR:
thai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IT893_08935 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
GntR
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QPO13611
LinkDB
All DBs
Position
complement(1975093..1975962)
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AA seq
289 aa
AA seq
DB search
MSAIKLPAVSQEEGFSGYLREVWKFPMLTADEEYMLAHRYQDHDDTEAAHKLVTSHLRLV
AKIAFGYRGYGLPMADLVAEGNTGLMRAVQKFDPERGFRLSTYAMWWIRAAVTEYILQSW
SMVKLGTMAAQKKLFFSLRKAKRQLNIYDNGELSPEEADQVAEKLGVTGREALEMNRRLA
ARDFSLNTPMPKDEGMEYLDTLSSDAPSPEALVADAEERVLHNGMLKNALGELPEREQEI
IKARFLSDDPITLEKLGERFGVSRERVRQLEARAFKKIQESVLTQHSAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattaaattacctgctgtttcccaggaagagggtttctcgggctatctccgt
gaagtctggaaattcccgatgcttacggcggacgaagaatacatgctggcccaccgttat
caggaccatgatgacaccgaggctgcccacaaacttgttaccagtcacttgcgtcttgtt
gccaaaatcgcgtttggttatcgcggttacggcctgccgatggcagaccttgtcgcggag
ggcaataccggcctgatgcgtgccgtgcagaagttcgatccggaacgtggtttccgcctg
tcgacttatgcgatgtggtggatccgtgctgcggtgactgaatacatcctgcaaagctgg
tcgatggtcaaactcggcaccatggcggcgcagaagaaactgttcttcagcctgcgtaaa
gccaagcgtcagcttaacatttatgacaatggcgaactttcgccagaggaagctgatcag
gttgccgaaaaacttggtgtgaccggtcgtgaagcgcttgaaatgaaccgccgtcttgcg
gcgcgcgatttctcgcttaacactccgatgccgaaagacgaggggatggaatatctcgat
accctgtcgtctgacgcaccgagcccagaagcactggttgccgatgccgaagaacgtgtt
cttcataacggcatgctgaaaaacgcacttggcgaattgcctgaacgtgaacaggaaatc
atcaaggcccgtttcctcagtgatgatccgatcacgctggaaaagcttggtgaacgtttc
ggtgtcagccgtgaacgcgtccgtcagcttgaagcacgcgccttcaagaaaattcaggaa
agcgtcctgacgcagcactcagcagcgtaa
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