Thalassospira sp. A40-3: IT893_10815
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Entry
IT893_10815 CDS
T08364
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
thai
Thalassospira sp. A40-3
Pathway
thai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT893_10815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thai02000
]
IT893_10815
Transporters [BR:
thai02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IT893_10815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QPO13895
LinkDB
All DBs
Position
complement(2365116..2366105)
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AA seq
329 aa
AA seq
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MGVSLAVAATAAQPAFADEAAICYNCPPEWADWGGQLKNISKDLGIDVPQDNKNSGQTLS
QLLAEKENPVADVAYYGVSFGIKANEAGVVQNYKPTNFDAIPDGLKDPNGAWFAIHSGTI
GLFVNVDALDGAPVPQSWNDLLKPEYAGMVGYLDPSSAFVGYAGAVAINRAMGGSLDDFT
PGIEFFKKLKENDPIVPKQTAYARVLSGEIPILLDYDFNAYRAKYKDSANVEFVIPSEGT
VTVPYVMSLVANNPHGENGKKVLDYVMSDKGQSHWANAFLRPVIPSAMSPEAASKFLPEA
DYARSQPVDYAKMATVQTGFSDRYLAEVR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgagccttgcggttgctgccacggcggcacagcctgccttcgctgatgaagca
gcgatttgctataactgcccgccggaatgggctgactggggcggacagctcaagaatatt
tcgaaagatctgggcattgatgtcccgcaggataacaaaaactcgggccagaccctgtcg
cagcttttggcggaaaaagaaaacccggttgccgatgttgcctattacggtgtgtcgttt
ggcatcaaggccaacgaagccggtgttgttcagaactacaagccgaccaatttcgatgcg
atcccggatggtctgaaagacccgaacggcgcatggtttgcgatccattccggcacgatt
ggcctgtttgtcaatgttgacgcgcttgacggcgcgccggtcccgcaaagctggaatgac
cttttgaagccggaatatgcgggcatggtcgggtatcttgacccatcaagcgcctttgtc
ggctatgccggtgcggttgcgatcaaccgtgcgatgggtggatcacttgatgatttcacg
ccgggtatcgagttcttcaagaagctgaaggaaaatgatccgatcgtgccgaaacagacc
gcctatgcacgagttctgtcgggcgaaattccgatcctgcttgattatgatttcaacgcc
tatcgcgcgaaatacaaggacagtgcgaatgttgaattcgttatcccgtccgagggcacg
gttacggtgccgtatgtcatgagcctggttgccaacaacccgcatggcgagaacggcaag
aaggttctggattacgtgatgtcggacaaaggccagtcccattgggcaaatgccttcctg
cgtccggtgatcccgagtgcaatgtcgccagaagcggcatccaagttcctgccggaagcc
gactatgcccgttcccagccggttgattacgccaagatggcaaccgtacagaccgggttc
tctgaccgttatctggccgaggtacgttaa
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