Thalassospira sp. A40-3: IT893_12830
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Entry
IT893_12830 CDS
T08364
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai00550
Peptidoglycan biosynthesis
thai01100
Metabolic pathways
thai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IT893_12830 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IT893_12830 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thai01011
]
IT893_12830 (mrdA)
Enzymes [BR:
thai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IT893_12830 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IT893_12830 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
BPL_N
Motif
Other DBs
NCBI-ProteinID:
QPO10654
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All DBs
Position
2774882..2776798
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AA seq
638 aa
AA seq
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MWHRDSDRFRLFTRRALMLGAGKGVLLTGLAARMYYLQVLESDRYQTLADENRISHRLLP
PPRGLVTDRFGAPLAVNRQNYHIMIVREQTPDVRRTLEILDQIIELGPDTIERVERDAAR
RRSFVPVTVRDNLTWDEVARVGVNAPDLPGLIIDAGRSRDYPEGPHLAHTLGYVAAVSEK
ELTGDPLLELPGFTIGKSGVEKVYDLALRGTAGTSQVEVNALGRVIRELEREEGDSGNTV
VMTLDLELQRYTNQRLSDQESAAAVVMDIHNGEVLALSSHPAYDPNAFTNGISHKLWNSL
VNNPYAPLSNKAVNGTYAPGSTFKMCVALAGLEAGIISPNQKFFCNGHLDLGNARFHCWK
RGGHGWMNMHDSIKHSCDVYYYEISQKIGIDRIAAMANKLGLGEDTGIDLPNERSGLIPT
KDWKEIQLGKRWQGGETLIASIGQGYVLTTPLQLCTMTARLASGKAVRPHLTRDNVTPEG
VTSRQAEEFPELQVSRANLARIRDAMNGVTNELRGTGHGARIAIKGMEMAGKSGTSQVRR
ITMRERQTTGVLDNNDLPWKYRDHALFVAFAPVDNPRYACSVVVEHGGGGSSVAGPIVRD
LLLKAQELQSARQGISAADQPNSANLRRNPAHTDQDEG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatcgtgactcagaccggttcagactgtttacccgacgcgccctgatgctgggt
gcgggcaagggtgtattgctgactggtcttgccgcgcggatgtactacctgcaggtgctt
gaaagcgaccgctaccagacgctggccgatgaaaaccgcatttcacaccgcctgctgccg
ccaccgcgtggactggtcaccgaccgtttcggtgcaccgcttgccgtaaaccggcagaac
tatcacatcatgatcgtgcgcgaacaaacccccgatgtccgccgcacgcttgaaatcctg
gaccagatcatcgagcttggccccgacaccatcgagcgcgttgaacgcgatgcagcccgt
cggcgttcctttgttccggtcacagtgcgcgataacctgacatgggatgaggtcgcacgc
gtcggcgtcaatgcacccgaccttcccggactgatcattgatgccggacgatcgcgcgac
tatcccgaaggaccgcaccttgcccatacactgggttatgttgctgcagtatccgaaaag
gaactgacaggcgatccgcttttggaattgccgggctttaccattggcaaaagcggcgtt
gaaaaggtttatgacttggcactgcgtggcacggccggcaccagccaggtcgaagtcaac
gcactgggccgcgttattcgcgaacttgaacgcgaagaaggtgacagcggcaacactgtc
gtcatgacgcttgatcttgaattgcagcgctacaccaatcagcgactgtcggatcaggaa
agtgcggccgctgtggttatggacatccataatggtgaagtactcgccctttcgtcgcat
ccggcctatgacccgaatgcctttaccaatggtatttcgcacaagctttggaacagtctg
gtcaacaacccgtatgcaccgctttccaacaaggctgtgaacggcacctatgcgccgggt
tcaaccttcaagatgtgcgtcgcacttgccggactggaagcaggcattatttcgcccaac
cagaaattcttctgcaacgggcatcttgatcttgggaatgcacgtttccactgctggaaa
cgcggcggtcatggctggatgaacatgcatgactcaatcaagcattcctgtgacgtctat
tactatgaaatttcccagaaaatcgggatcgaccgcattgcggccatggcaaacaagctg
ggccttggcgaagataccggcattgaccttcccaacgaacgtagcggccttatcccgacc
aaggactggaaggaaatccagcttggcaaacgctggcagggcggcgaaacgctgattgct
tctatcgggcagggttacgttctgacaacgcctttgcaactttgcacgatgacggcccgt
ctggcctctggaaaagccgtgcgcccgcacctgacgcgtgacaacgtcacccccgaaggt
gtcaccagccgccaggccgaagaattcccggaacttcaggtcagccgcgccaacctggcc
cgaattcgtgatgcgatgaacggcgtgaccaacgaattgcgtggcacaggccatggcgca
cggatcgcgatcaagggcatggaaatggctggcaaaagtggtaccagtcaggttcgccgc
atcaccatgcgtgaacgccagacaaccggggtgctcgataacaatgacttgccgtggaaa
taccgtgaccacgccctgtttgttgcctttgcgccggtcgataacccgcgttacgcctgc
tctgtggtcgtcgaacatggcggcggtggttcgagtgttgcgggcccgattgttcgtgac
ctgctgctaaaagcgcaggaactgcaatctgcgcgtcagggtatctcggccgccgaccag
cccaatagtgcaaatctccggcgcaatccggcccacaccgatcaggacgagggttaa
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