Thalassospira sp. A40-3: IT893_13030
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Entry
IT893_13030 CDS
T08364
Name
(GenBank) cache domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
thai
Thalassospira sp. A40-3
Pathway
thai02020
Two-component system
thai02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IT893_13030
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IT893_13030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thai02035
]
IT893_13030
Bacterial motility proteins [BR:
thai02035
]
Flagellar system
Chemotaxis proteins
MCPs
IT893_13030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_2
dCache_2
MCPsignal
Cache_3-Cache_2
HAMP
DUF4559
DUF1664
Phenol_hyd_sub
DUF3450
Motif
Other DBs
NCBI-ProteinID:
QPO10688
LinkDB
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Position
complement(2815367..2817058)
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AA seq
563 aa
AA seq
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MLSLSSVKIGTRMLIIVAGAVLAVLLVGAFGLTELRQNMLEDRKTKTKNLVESTINLIGH
YHALEQSGEMTTEEAQNAAKGAVAALRYDEKNYFFVFDHTPVLLIHDIKKDLVGKNLTDN
VDGSGKFLYREFVRVAEEKGEGFVDYTYKVPNSDDLRPKLSFVKDFKPWGWIVATGIYID
DVNAVFMQIMLVMGGVALAILVAVVGVSLMISRGITRPLFDISENMLRLSQGDHNIEVNY
THQKSEIGDLARAMDIFKSKTIEMEEMRTQREEQERIAEEDKRAALRKMADSFEASVGQV
VAQVIEASGNMQSSANAMTDTSKQVGERSTVVSAASQEMSTNVETVASAAEELSTSIAEI
SNQVAQSATIAKGAVQTSEETHQKIELLAEAANQIGEVVSLITDIAEQTNLLALNATIEA
ARAGDAGKGFAVVANEVKNLANQTAKATEDIRSQVSDIQVATSNAVNAIAEIAETIRSLD
GATTTIASAVEEQGAATQEIARNVEQASHGSRDVSENISGVSTAANDAEKLSGEVLGLAE
GLGRQAAVLNEAVESFLAEVRNA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcactgagttcggtgaaaatcggcacacgtatgctgattattgtcgcgggcgcg
gttcttgcggtgttgctggtcggggcgttcggtctgaccgaattgcgccaaaacatgctt
gaagatcgcaagacaaaaacgaaaaaccttgttgaatccacaatcaatttgattggtcat
tatcatgcgctggaacagtccggcgaaatgaccaccgaagaggcgcaaaatgcggccaaa
ggcgctgttgcagcccttcgttatgatgagaagaactatttctttgtatttgatcacacg
ccggttcttctgatccatgacatcaagaaggaccttgtcggcaagaacttgaccgacaat
gtcgatggatcgggcaaattcctttatcgcgagttcgtgcgcgtcgccgaagaaaagggc
gagggttttgtcgattatacctacaaggtgccgaattcggatgatcttcgtccgaagctt
tcattcgtcaaggatttcaaaccgtggggctggatcgtcgccaccggtatttacatcgat
gatgtaaacgctgttttcatgcaaatcatgctggtgatgggtggtgttgccttggcgatc
ctggttgcggttgttggtgtctcgctgatgatcagtcgcggtattacccgaccgcttttc
gatatttcggaaaatatgctgcgtctgtcgcagggtgatcacaatatcgaagtcaattac
acccaccagaaaagcgagatcggcgatctggcgcgggcgatggatatcttcaaatcgaaa
accatcgaaatggaagaaatgcgcacccagcgtgaagagcaggaacgcatcgccgaagaa
gacaagcgtgcggcccttcgcaaaatggccgacagtttcgaagccagtgtcgggcaggtt
gtcgcccaggtgatcgaggcatcgggcaatatgcaaagctctgccaatgcgatgaccgat
acctccaagcaggtcggtgaacgttcaacggttgtttcggcagcatcgcaggaaatgtcg
accaacgtggaaacggttgcctcggcggctgaggaactgagcacgtctattgccgaaatc
agcaatcaggtcgcacagtccgcaaccatcgccaaaggtgcggttcaaacctcagaagaa
acgcaccagaaaatcgaattgctggcagaggcggcaaaccagattggtgaagttgtttcg
ctgatcaccgacattgccgaacagacgaaccttctggccctgaacgcaacgatcgaagcc
gcgcgtgccggtgatgccggcaagggctttgctgtggttgccaacgaggtcaagaacctt
gcaaaccagacggcaaaggcaaccgaggatatccgctcccaggtcagcgacattcaggtc
gccacatccaatgcagttaatgcgattgccgaaattgccgaaaccatccgaagccttgac
ggggcgacgacgacaatcgcgtccgctgttgaagagcagggggccgcaacccaggaaatc
gcgcgcaacgttgaacaggcatcacacggcagccgcgatgtatctgaaaatatctcgggc
gtgtcgacggcagcaaatgacgccgaaaagctttcgggcgaggtgcttggccttgccgag
ggtcttggacgtcaggcagctgttctgaacgaagcagttgaatcgttccttgccgaagtg
cgtaacgcctaa
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