Thalassospira sp. A40-3: IT893_13305
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Entry
IT893_13305 CDS
T08364
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai00630
Glyoxylate and dicarboxylate metabolism
thai00680
Methane metabolism
thai01100
Metabolic pathways
thai01120
Microbial metabolism in diverse environments
thai01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IT893_13305 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
IT893_13305 (fdhF)
Enzymes [BR:
thai01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
IT893_13305 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_6
Fer4_9
Fer4_2
Fer4_15
Fer4_16
Fer4_8
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
QPO10741
LinkDB
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Position
complement(2878731..2881610)
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AA seq
959 aa
AA seq
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MSLIKEVDYGTPAKKSEKTVTLTIDGKDITVPEGTSVMRASMEAGIQVPKLCATDMVDAF
GSCRLCLVEVEGRNGTPASCTTPAADGMVVHTQTERLKKIRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGENHVQVRQNGEENPRYMAKDETNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFESRVSPGMHENFLDSECVSCGACVQACPTATLQEKS
VIEIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPYKDGKANRGHSCVKGRFAYGYA
NHKDRILNPMIRESVDEPWQEVSWEEALRFTAEKFKGIQAKYGKGALGGITSSRCTNEET
FLVQKLIRAGFGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEHTDVVILIGANP
TDGHPVFASRLKKRLRQGAKLIVIDPRRIDLVRSPHIEAVAHIPLRPGTNVAVLTSLAHV
IVTEGLFDEAFVRERCDWDEFQDWATFVSDPKHSPEAIAEMIGVDGETMRKAARTFATGG
NGAIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHIQDSATRDIFEDIWGVKLDDEPGLRIPNMLDAAVEGTFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMT
PLNGFADWEVTQNLARAMGLDWNYTHPSQVMDEIAKTTPSFAKVSYDLLEEKGSVQWPCN
DKAPEGTPVMHIDGFVRGKGKFVVTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRT
ENTTWHKEDLLEIHPHDAEQRGIREGDWIRLASRSGETSLRATITDRVAPGVVYTTFHHP
GTQANVITTDYTDWATNCPEYKVTAVQVSSSNGPTEWQVEYDRQAEQSRRIKPRVDAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgatcaaagaagttgactacggaacccccgccaagaaatccgaaaagacggta
accctgaccattgatggcaaggacattaccgtgcctgaaggcacctctgtgatgcgcgcc
tcgatggaggcaggcattcaggtcccgaaactttgcgcaaccgacatggtcgatgcattc
gggtcatgccgcctgtgtctggttgaggtcgaaggccgcaacggcaccccggcatcctgc
acgacgccggccgctgacggcatggttgtccatacccagaccgaacggcttaagaaaatc
cgcaaaggcgtgatggagctttatatctctgaccatccgctcgattgcctgacctgtgcc
gccaatggcgactgcgaattgcaggatatggccggtgcggttggcctgcgcgacgtgcgt
tatggctatgagggtgaaaaccacgttcaggtccgccagaacggcgaagaaaacccgcgc
tatatggccaaggatgaaaccaacccgtatttcacctacgacccgtcgaaatgcattgtc
tgttcgcgctgtgtgcgggcctgcgaagaagtgcagggcacctttgcgctgaccatcgaa
ggccgtggctttgaatcccgcgtgtcaccgggcatgcatgaaaacttcctcgattccgaa
tgcgtatcttgcggtgcctgtgtgcaggcctgcccgaccgcaacgcttcaggaaaaatcg
gtcattgaaatcggtcagccggaacactccgttgtcaccacctgtgcctattgcggggtg
ggctgctcgttcaaggcggaaatgcgcggcgaagaacttgtccgcatggtcccctataag
gatggcaaggccaaccgtggtcattcctgtgtgaagggccggtttgcctatggctatgcc
aatcacaaggaccgcatcctcaacccgatgatccgcgaaagtgtcgatgaaccctggcag
gaagtcagctgggaagaagcccttcgctttaccgcagaaaagttcaagggcattcaggcc
aaatacggtaagggtgcgctgggcggtattacctcgtcacgttgcacgaacgaggaaact
ttccttgttcaaaaactgatccgtgccgggtttggcaataacaacgtcgatacctgtgcc
cgtgtttgccactcgccgacgggttatggccttaaaaccacgtttggtacctcggccggg
acgcaggattttgattctgtcgaacataccgatgttgtcatcctgattggcgccaatccg
accgatggccatcctgtctttgcctcgcgcctgaaaaagcgcctgcgtcagggggcgaaa
ctgatcgtcatcgatccgcgccggatcgaccttgtccgttccccgcatatcgaggcggtc
gcccatatcccgctgcgtccgggtacaaacgtcgcggttctgacgtcacttgcccatgtt
attgtcaccgaaggcctgtttgacgaggcattcgtgcgtgaacgttgcgactgggacgaa
ttccaggattgggcaacctttgtgtccgatccgaaacacagccccgaagccatcgccgag
atgatcggtgttgacggcgaaaccatgcgcaaggccgcacgcacctttgccaccggcggc
aatggcgcgatctattatggtctgggtgtcacagaacacagccagggttccaccaccgtg
atggcgattgccaaccttgccatggcgaccggcaatatcgggcgtccgggtgtgggtgtg
aacccgctgcgtggtcagaacaacgtgcaaggttcgtgtgatatggggtcgttcccgcac
gaacttccgggctatcgccatattcaggacagtgccacccgcgatatttttgaggatatc
tggggtgtcaaactggatgacgagccgggtcttcgtatccccaatatgctagatgcggct
gtcgaaggcacgttcaagggcatctatattcagggcgaagatattcttcaatctgacccg
gatacgaaacatgtcgcggccggtctggcagcaatggaatgtgtggtcgtccatgacctg
ttcctcaatgaaaccgcgaactacgcgcatgtcttcctgccggggtcgaccttccttgaa
aaggacgggacctttaccaacgccgaacgccgtattaaccgcgtgcgcaaggtgatgaca
ccgctgaacggctttgccgattgggaagttacccagaacctggcccgtgcgatggggctt
gactggaactacacccatccgtctcaggtcatggatgaaattgccaagaccacgccaagc
tttgccaaagtcagctatgacctgctggaagaaaagggctcggtccagtggccgtgcaat
gacaaggcccccgaagggaccccggtcatgcatatcgatggctttgttcgtggcaagggc
aagtttgttgtcaccgaatatgtcgcaaccgacgaacgtacaggcccgcgcttcccgctt
ctgctgacgacgggacgaatactcagccagtacaatgtcggcgcacagaccaggcgtacg
gaaaacacgacctggcataaggaagacttgctggaaatccacccgcacgatgccgaacaa
cgtggcattcgcgaaggcgactggatccgtctggcatcccggtcgggcgaaacatccctt
cgtgccaccattaccgatcgcgtcgcaccgggtgtggtttacacaaccttccaccatccg
ggcacacaggccaacgtgatcaccaccgactataccgactgggcaacaaactgcccggaa
tacaaggttaccgcggttcaggtttcgtcctccaatggcccgaccgaatggcaggtcgaa
tatgatcgtcaggccgaacagtcgcgtcggatcaaaccgcgcgtcgatgccgccgaatag
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