Thalassospira sp. A40-3: IT893_14655
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Entry
IT893_14655 CDS
T08364
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thai
Thalassospira sp. A40-3
Pathway
thai03420
Nucleotide excision repair
thai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IT893_14655
03430 Mismatch repair
IT893_14655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thai03400
]
IT893_14655
Enzymes [BR:
thai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT893_14655
DNA repair and recombination proteins [BR:
thai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IT893_14655
MMR (mismatch excision repair)
Other MMR factors
IT893_14655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_12
AAA_22
AAA_16
vATP-synt_AC39
DUF3553
TusA
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QPO13928
LinkDB
All DBs
Position
complement(3178238..3180598)
Genome browser
AA seq
786 aa
AA seq
DB search
MDDPFEIDEFAASPEMRLADTPTPAYLDNLNAEQRDAVETLDGPLLVLAGAGTGKTRVLT
TRLAHLLETKAQTERLHPQQILAVTFTNRAAKEMQERVAQALGRPVEGWWLGTFHSLSAR
LLRRHADLIGLKSNFTILDSDDQVRLLKQIMDAEQIDPKKWPAKQLMGIIQRWKDKGLTP
ERVNESVEFANGGAKHLYKIYQERLKVLNACDFGDLLLHCLPLFQQHPEVLKQYQNTFRY
ILVDEYQDTNVAQYLWLRAMAMVHRNICCVGDDDQAIYSWRGAEVGNILRFESDFPGAKV
VRLEQNYRSTPHILAAASKLITFNDGRLGKELWTEIDTGDKVFVKGVWDGEAEARLIGED
IEALQRKGVGASQIAVLVRAGFQTREFEERLITLGIPYRVVGGPRFYERQEIRDALAYIR
LVAQPDDSLAFERIVNVPKRGVGKATLQTLHQYSRDQAISLPAAARDLLDTEELKPKMRQ
SIGGLLGDFKRWREMLGNSSHVEVVETVLDESGYTDMWRTSKEIDAPGRLENLKELVSAI
GEFENLTSFLEHVSLVMENAQNDHEEKVTIMTLHAAKGLEFDYVFLPGWEEGVFPHQRAM
DESGVKGLEEERRLAYVGITRARKRATICYAANRRIYNQWQSALPSRFVDELPDEHIERS
SDTGLGGHGGNHSPGAWGADDWMKMPSWASDSGSTPSRNPVSGAGERKFASSGWQDRVRK
NVIDVKPDGETSYSTSSNSSKYKVGDTVRHRKFGSGTVRAVDGNKLEIHFESVGTKKVVD
SFILPG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcccttcgaaattgatgaattcgccgccagccccgaaatgcgtctggccgat
acaccgaccccggcatatctcgacaatctgaatgccgagcagcgcgatgctgtcgaaacg
ctcgacgggccattgcttgttctggcaggtgccggaaccgggaaaacgcgtgttttgacc
acgcgtctggcgcatcttctggaaaccaaggcgcaaaccgaacgcctgcatccgcagcag
atccttgccgttacctttaccaaccgtgcggcaaaggaaatgcaggaacgtgtcgcacag
gcgcttggtcgtccggttgaaggttggtggctgggaaccttccactcgctctcagcgcgc
ttgttgcgccgtcatgccgatctgatcgggttaaagtcaaacttcaccatccttgatagc
gatgatcaggtgcgcctgcttaagcagatcatggatgccgaacagatcgatccgaaaaaa
tggccagccaagcagctgatggggatcattcagcgctggaaggacaagggtctgacgcct
gaacgggtcaatgaaagtgtcgagttcgccaacggcggggccaagcacctttacaagatt
tatcaggaacgcctcaaagtcctgaacgcctgtgacttcggcgacctgttgctgcattgc
ctgcccctgttccagcagcacccggaagtcctgaaacagtatcagaacaccttccgctat
attctggttgacgagtatcaggataccaacgttgcccagtatctgtggctgcgtgcaatg
gcgatggtccatcgtaacatttgctgcgttggtgatgatgatcaggcgatctatagctgg
cgcggggccgaggtcggcaacatcctgcgctttgagtctgatttcccaggtgccaaggtg
gttcgtcttgagcagaactatcgttccaccccgcacattctggctgccgcgtccaaactg
atcacgtttaacgatggccgtctgggcaaggagctgtggaccgagattgatactggcgac
aaggtgtttgtcaaaggtgtctgggacggtgaagcagaggcccgcctgatcggtgaggat
atcgaagccctgcagcgcaagggcgttggcgcatcgcagattgccgttctggtgcgtgcc
ggtttccagacccgcgagtttgaggagcgcctgatcacgctgggtattccgtaccgcgtt
gtcggtggtccgcgcttctatgaacgtcaggaaatccgtgatgcgctggcctatatccgg
cttgttgcgcagcctgatgacagtctggcatttgagcgcatcgtcaatgtacccaagcgc
ggggttggcaaggcaacgcttcagacattgcatcaatattcccgtgatcaggcgatctcg
cttccggcggcggcgcgcgatttgttggataccgaagaactcaaacccaagatgcgccaa
agcatcggcggtcttttgggggatttcaaacgctggcgcgaaatgcttggcaacagcagc
catgtcgaagtcgttgaaaccgttcttgatgaaagcggctataccgatatgtggcggact
tcgaaggaaattgatgcgcccggccgtctggaaaacctgaaagaactggtatccgcaatt
ggcgagttcgagaacctgaccagcttcctcgaacatgtctcgttggtgatggaaaatgcg
cagaacgatcatgaggaaaaagtcaccatcatgaccctgcacgccgccaagggactggag
ttcgattatgtcttcctgcccggttgggaagagggcgtcttcccgcatcaacgcgcgatg
gatgaaagcggggtcaagggcctcgaggaagagcgtcgtcttgcctatgtcgggatcacc
cgggcgcgcaaacgtgcgaccatctgttatgcggccaatcggcgcatctataaccagtgg
caatcagccctgccatcgcgctttgttgatgagttgccggacgaacatatcgaacgcagc
agcgataccggtcttggcgggcatggtggcaatcattcaccaggtgcgtggggtgccgat
gactggatgaaaatgccaagctgggcaagcgacagtggcagcacgccgtcgcgcaatccg
gtatcgggtgcgggggagcgtaaattcgcctcaagcggttggcaggatcgcgtgcgcaag
aacgtgattgatgtgaagcccgacggtgaaaccagttattccaccagttccaactcatcg
aaatacaaggtgggtgatacggtgcgccatcgcaagttcgggtcgggaaccgtccgtgcg
gtcgatggcaacaaactggaaatccatttcgaaagtgtcggcaccaagaaagtggtcgac
agcttcatcctgccggggtaa
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