Thalassospira sp. A40-3: IT893_16650
Help
Entry
IT893_16650 CDS
T08364
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
thai
Thalassospira sp. A40-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS
Sigma54_activ_2
PAS_4
AAA_5
PAS_8
AAA
PAS_3
Mg_chelatase
AAA_16
PAS_7
HTH_8
Diguanyl_cycl_sensor
GAF_PdtaS
AAA_2
TIP49
T6PP_C
IstB_IS21
AAA_22
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QPO11366
LinkDB
All DBs
Position
3627835..3629781
Genome browser
AA seq
648 aa
AA seq
DB search
MRISEINPLPVMIENLHLQALLAHTHPTLLIHPKTDRIVFANQAAANLLGRSIEELLATS
MSALHKGQVPSLVVFSEAAFYHGFAWTRGLDLTRPDGTELKLEHEARPLILDGEDYLTVT
ISDLDARHRRDVDSEADDYLREGIAEWRRAERFFREIERENQLILGAAGEGIYGVNSDGI
TTFVNPAAERMLGWTAEELVGREIHSIIHHSHVNGDPYHAEQCPIYNAFREGIVRRVDDE
VFWRSDGKPIRVEYTSTPIRDHGLVIGAVIVFRDITERKIAEEKLHAALAEVDRLRERLE
LENAYLQEEILSTNNHHEIIGQSDAIQGALKQIDLVAPTDANVLITGESGTGKELIARAI
HQASARSDRVLVRVNCAAIPHELFESEFFGHVRGAFTGAVRDRVGRFELADGGTLFLDEV
GEIPLELQGKLLRVLQDQKFERIGEERTREVNVRLIAATNRDLKEEVRQGRFREDLYFRL
NVFPIECRPLRERPDDIPPLASHFLRNICQRLNIAQPTLTKGQVRTLQNYGWPGNARELE
NVIERAAILAHDGKLHFDLPEQGGRDSRKLAAPTTEPDSKPEKTVLTRGELRQTEYDNII
HALTMTKGKVFGENGAAALLDIKPTTLASRIKKFKIDRRSFAANETID
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcagtgaaatcaatcccctaccggtgatgattgaaaacctgcacttgcaggca
ttgctcgcccacacccatccaaccttgctcattcaccccaaaacggaccggattgtcttc
gccaatcaggccgctgcgaacctgttggggcgcagcatcgaagaacttctggcaacctcg
atgagtgcgctgcacaaaggtcaggtgcccagtctggtcgtatttagcgaggccgccttt
tatcacggatttgcctggacccgcgggctggacctgacccgtccggacggcacggaactg
aaactcgagcacgaagcccggccgctcattctggacggcgaagactatctgaccgtcacg
atttccgatctcgatgcccgccatcgtcgcgatgtggactccgaggccgatgattacctt
cgcgaaggcatcgccgaatggcgccgtgccgaacggtttttccgcgagattgaacgcgaa
aaccagctgatcctgggtgccgctggcgaaggcatttacggggttaacagcgacggcatc
acgacattcgtcaatccggcggccgaacgcatgttgggctggacggccgaggaactggtt
ggccgcgaaatccattcgatcatccaccattcgcacgtcaatggcgatccctatcacgcc
gaacaatgcccgatttacaacgcgtttcgcgaaggcatcgtcaggcgggttgatgacgag
gtcttctggcgcagcgacggcaaacccatccgggtggaatatacctccaccccgatccgt
gaccatgggctggtgatcggggcggtgattgtttttcgcgacatcaccgaacgtaaaatt
gccgaggaaaagctgcacgccgcccttgccgaggtcgaccggctgcgtgaacggctggag
cttgaaaacgcctatctgcaggaagaaatcctttcaaccaacaaccaccatgaaatcatc
ggccagtccgatgccattcagggcgcactcaaacagatcgaccttgtcgcgcccaccgat
gccaacgttctgatcactggtgaatccggtacgggcaaggaactgattgcgcgcgccatc
catcaggccagcgcgcgatccgatcgcgttctggtgcgcgtgaactgtgctgcaatcccg
catgaactgtttgaaagcgaatttttcggccatgtccgcggtgcctttaccggtgccgtg
cgtgatcgtgtcgggcggtttgaattggctgatggcggcacgctatttctcgatgaagtc
ggggaaatcccgctggaacttcagggcaagttgctgcgtgttttgcaggatcagaagttc
gaacgcatcggcgaagaacgcacacgcgaggtcaatgtccgcctgattgccgccaccaac
cgcgacctaaaggaagaagtccgtcagggacgtttccgcgaagacctgtatttccgtctc
aacgttttcccgattgaatgccgccccttgcgcgaacggcccgacgatatcccgccgctt
gcatcgcacttcctgcgcaatatctgtcagcgtcttaatatcgcccagccgacactcacc
aaggggcaagtccgcaccctgcaaaactatggctggccggggaatgcgcgtgaactggaa
aacgtcatcgaacgcgctgcgatcctggcccatgacggcaagcttcatttcgacctgccc
gaacagggcgggcgcgacagccgcaaattagcagcgccgacgacagagcccgacagcaaa
cctgaaaaaaccgtactgacccggggtgagctgcgccagactgaatatgacaacatcatc
catgcgctgaccatgaccaagggcaaggtgtttggggaaaatggtgcggccgcccttctc
gatatcaaaccaaccacgctggcctcgcgtatcaagaaattcaaaatcgaccgtcgcagc
tttgcggcaaacgaaaccatcgactaa
DBGET
integrated database retrieval system
