Thalassospira sp. A40-3: IT893_18170
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Entry
IT893_18170 CDS
T08364
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thai03400
]
IT893_18170 (addA)
Enzymes [BR:
thai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IT893_18170 (addA)
DNA repair and recombination proteins [BR:
thai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IT893_18170 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QPO11600
LinkDB
All DBs
Position
complement(3935463..3938927)
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AA seq
1154 aa
AA seq
DB search
MTDMRGTDPNVLQRNASDPTASVWVSASAGAGKTKVLSDRVLRLMLSGTEPHRILCLTFT
KAAAAEMANRVNERLGLWATMEDRDLQADLANLAGAAPSADETIRARQLFARVLDAPGGM
KIQTIHAFCQSLLRRFPLEAGLAPHFEIMDDRTAAETMADVQEEVLAFARTGRDDDLAHA
LSVVTGQVREGAFGEVMSELARERGRLKRMLANLGGANRMRDAVYKALGVPVGLDDETIL
TKALSDDAFDRDGLMRGLAALEAGTKTDTARVPALAQFLEKTNVEDRLAVFSEYRSVFFT
TAGEPRAKLITKGAAENHPMGADALEQECARLVEVDRQRKAAAMAGATSALITIGNAMLD
RYATKKALHARLDYDDLILTSLQLLQRQAGIAGWVLFKLDEGLDHVLIDEAQDTNPEQWE
VVRILAEEFFIDAGRHADKPRTIFAVGDAKQSIYSFQRADPEKFAEMRRYFRERAREIAA
DWREVPMNISFRSTDAVLGTVDRVFAGPVAKQGVGDDGADVLHSPFRVGQAGRIELWPAV
EPEERAPEDPWTPPIRIVRLEDPEIRLARVIAGRIRHAIDEKEILTSRGRPVRAGDFMIL
VRRRTAFVDEVVKALKERNVPVAGVDRMQITDQLAVMDLVAFGRFLLMPEDDLTLAEVLK
SPLIGLDDDQLFEIAHNRPRTLWHALREKAALVEDGSPFARAYAFLFKWLGRVDYERPFE
LYAELLGGRGEEARGVRARLVGRLGIEANDPIDEFLNLAMGYEADHAPTLQGFLHWLMAG
DAEIKRDLEQSGRDEVRIMTVHGAKGLQAPIVFLPDTMQVPTQAPNLFWQEDRNLMFWLP
RVALETDLVARLRDDIALKRDQEYNRLLYVALTRAEDRLYICGWQGRRKAPEHCWYNLCS
QAMEGYAKPAQIDLSTYSGSGWEGEGWVWETDQSQAPKPDRADDISDSKQSIKRQLIRAV
APEESFPPKPLAPSRPLEDEPAVQSPLGGDQGQSFKRGLLIHKLLELLPDLPEQARLKAA
ERFLAQPVHALDPDLQVEIANETLGIFDNPAFAPVFAPGSRAEVPLVGIVGGDVVSAQID
RLVVRDDEVMIVDYKTNRPPPRDVEDTPRAYRRQMSIYRAALAQMYPGKKVRCFILWTNG
PWMVELPDHILTFG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatgcgcggaactgatcccaacgtcctgcaacgcaatgcatccgatccgaca
gcatcggtctgggtgtcggcttcggcaggcgcgggcaagaccaaggtgctgtcagatcgc
gtcttgcgcctgatgctttcgggcaccgagccacatcgtatcctgtgtctgacctttacc
aaggccgcggcggcggaaatggccaaccgtgtgaatgaacgattgggtctgtgggccacc
atggaggatcgcgaccttcaggccgatctcgccaaccttgccggtgcagcaccgagtgcc
gatgaaaccatccgcgcgcgccagctttttgcccgtgtgctggatgcgccgggcggtatg
aagatccagaccattcatgccttctgtcagtcgctgttgcgccgtttcccgctggaagcc
ggtctggcgccgcattttgaaatcatggatgatcgcacggccgctgaaaccatggccgat
gtgcaggaagaggttctggcattcgcccgaaccggacgcgatgatgatctcgcccatgcc
ctgtctgtcgtcaccggtcaagtccgcgaaggtgcctttggtgaggtcatgagcgagctt
gcccgcgaacgtggtcgcctgaagcgcatgctagccaatctgggcggggccaatcgcatg
cgtgatgcggtctataaggcgcttggtgtgccggtcggacttgatgatgaaaccatcctg
accaaggccctttccgatgatgcctttgatcgcgatggcttgatgcgcgggttggcagcg
ctcgaggccggaaccaaaaccgataccgcacgcgtgccggcattggcgcaatttcttgaa
aagacgaatgtcgaagaccgtctggcggtgtttagcgaatatcgcagcgtcttcttcacc
acggcgggtgaaccgcgcgccaaactgatcaccaagggggcagcagaaaatcacccgatg
ggggccgatgcgcttgaacaggaatgcgcgcgtctggtcgaggtcgaccgccaacgcaag
gccgccgcaatggccggggcgacatcggcgctaatcaccatcggcaatgcgatgcttgat
cgctatgccaccaaaaaggccctgcatgcccgccttgattatgatgacctgatcttgacc
agtttgcagcttttgcaacgccaggccgggattgccggctgggtgttgttcaaactggac
gagggccttgatcacgtcctgattgacgaggcgcaggataccaaccccgaacagtgggaa
gttgtgcgtattctggccgaggaattctttatcgatgccgggcgccatgccgataagccg
cgtacaatctttgccgtcggcgatgccaaacaatcgatctatagcttccagcgcgccgat
cccgaaaaattcgccgaaatgcgccgctacttccgcgaacgggcgcgtgaaatcgccgcc
gactggcgtgaagtaccgatgaacatctcgttccgatccaccgatgccgttctgggcacg
gtggatcgtgtctttgccggtccggtcgccaagcagggtgtaggcgatgatggtgctgat
gtgcttcacagcccgtttcgggtcgggcaggccgggcggattgaactttggccggccgtc
gagcccgaagagcgcgcacccgaagacccctggacaccaccgatccgcattgtccgcctt
gaagatccggaaatccgccttgcccgcgtcattgccgggcgcatccgtcatgcgattgat
gaaaaggaaatcctgacatcgcgtggccgtccggtgcgcgcaggtgacttcatgatcctt
gtgcggcggcgtaccgcctttgtcgatgaggtcgtcaaggcacttaaggaacgcaacgtt
cccgtcgccggggtcgaccgcatgcagatcaccgatcagcttgcggtgatggatctggtg
gcgttcgggcggttcctgttaatgcccgaagatgacctgacactggccgaggtgcttaaa
agtccgctgatcggtcttgatgacgatcagttgtttgaaattgcccataaccgccccaga
actctttggcatgcgctgcgtgaaaaggcggctttggttgaagacggatcaccgtttgcg
cgcgcctatgccttcctgttcaagtggctgggccgggttgattacgaacgcccgtttgaa
ctttatgccgaattgctgggcggtcgcggggaggaagcgcgtggagtccgtgcccgtctg
gttggtcgtctggggatcgaggccaacgaccccattgacgaattcctcaacctcgcgatg
ggctatgaagctgatcatgctccgacgcttcagggcttcctgcactggctgatggcgggc
gatgccgagatcaagcgtgaccttgaacaaagcgggcgtgatgaagtccgcatcatgacc
gtgcatggtgccaaggggcttcaggcccccattgtgttcctgcccgataccatgcaggtg
ccgacacaggccccgaacctgttctggcaggaagaccgcaatctgatgttctggttgccg
cgtgtggcgcttgaaaccgatcttgttgcccgcctgcgcgatgacatcgcacttaaacgc
gatcaggaatataaccgcctgctgtatgtcgccctgacacgcgccgaagaccggctttac
atttgtggctggcaggggcggcgcaaggcgccagagcattgctggtacaatctgtgtagc
caagcgatggaaggctacgccaaaccggcgcagattgatctttcgacctattccggatca
ggatgggaaggggaaggctgggtctgggaaaccgatcaaagtcaggcgcccaaaccggac
cgcgccgatgatatttcggattcaaaacaatctataaaacgccagttaattcgggccgtt
gcgccagaagaatccttcccgcccaagccactggcgcccagtcggccgcttgaagacgaa
ccggctgttcaatcaccgctgggtggcgatcagggacaaagcttcaaacgtggtcttctg
atccataagcttttggaactgttgccagatctgccggagcaggcccgcctgaaggcagcc
gaacgcttccttgcccaaccggttcatgcgcttgatcccgatctccaggttgaaatcgcc
aatgaaacgctgggtattttcgataatccggcctttgccccggtctttgcgcccggatcc
cgggcagaggtgccgcttgtcggcattgtcggcggggatgtggtttcggcccagattgac
cggcttgtcgttcgcgacgatgaagtgatgattgtcgattacaaaaccaaccgtccgccg
ccccgcgatgtcgaagacacgccgcgtgcctatcgtcgccagatgtcgatctatcgtgcg
gccttggcgcaaatgtatcccggcaaaaaggtcaggtgtttcattctctggaccaatgga
ccgtggatggtagagttgcccgatcacattctgacatttggttag
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