Thalassospira sp. A40-3: IT893_19680
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Entry
IT893_19680 CDS
T08364
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thai03016
]
IT893_19680 (truB)
Enzymes [BR:
thai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IT893_19680 (truB)
Transfer RNA biogenesis [BR:
thai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IT893_19680 (truB)
Prokaryotic type
IT893_19680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF2969
Motif
Other DBs
NCBI-ProteinID:
QPO11881
LinkDB
All DBs
Position
4250173..4251099
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AA seq
308 aa
AA seq
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MARRRRGKSINGWLAVDKPLEITSSTVVNQVRRLLDANKAGHGGTLDPLASGVLPIAFGE
ATKTVAYVMDGSKSYRVTLKFGEARSTDDAEGEVIETSDHRPTEDEIKAVLGEFIGEIQQ
VPPKFSAIKVNGKRAYDLARRDEDVVLQPRPILIKDLRLVDMPDRDHAVFDVVSGKGAYM
RSLARDIALRLGTVGYIAALRRTSAGPFSEGNAIPLQELLDMDPDEVMKKLLPVETALDD
IPALALTEVEAQRLSSGQPVGLLPVAKRNALENPVVQDEIVCAMLHDRAVALAEITGGEI
RPVRVFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgccgtcgcggtaaaagcattaatggctggctggcggtggacaagcccctg
gagatcacgtcatcaaccgtggtcaatcaggtgcgtcgtctgcttgatgccaacaaggcc
ggacatggcgggacacttgacccgctggcgtctggcgttctgccaattgcctttggcgaa
gcaaccaaaacggttgcatatgtcatggatggcagcaaaagttatcgcgtaacgttgaaa
ttcggcgaagcgcgcagtacggacgatgccgaaggcgaggttattgaaacctccgaccat
cgtccgacggaagacgaaatcaaggctgtgctgggtgaattcatcggtgaaatccagcag
gtgccgccaaaattttcggcgatcaaggtcaatggcaagcgtgcctatgaccttgcgcgc
cgcgatgaagatgtggtgttgcagccacgtccgattctgatcaaggatcttcgactggtc
gacatgccagatcgcgatcacgccgtgtttgacgttgtgtcaggcaagggcgcgtatatg
cgatctttggcgcgcgatatcgcgctgcgcctaggcactgtgggctatatcgccgcgctt
cgccggacttcggcggggccgttttcggaagggaacgccattcccctgcaggaactgctg
gatatggacccggacgaggtgatgaagaaactgcttccggttgagaccgcgctggacgac
atcccggcgctggccctgaccgaagtcgaggcgcaacgcctttcctctggccagcctgtc
gggctgttgccggtggcaaagcgcaatgcccttgaaaaccccgtcgtgcaggacgaaatc
gtctgtgccatgctccatgaccgcgctgttgcgttggctgagatcactggtggcgaaatt
cgacctgtgcgtgtttttaatctctaa
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