Thauera sp. JM12B12: AAG895_05915
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Entry
AAG895_05915 CDS
T11674
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thaj Thauera sp. JM12B12
Pathway
thaj03030
DNA replication
thaj03430
Mismatch repair
thaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAG895_05915 (dnaE)
03430 Mismatch repair
AAG895_05915 (dnaE)
03440 Homologous recombination
AAG895_05915 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thaj03032
]
AAG895_05915 (dnaE)
03400 DNA repair and recombination proteins [BR:
thaj03400
]
AAG895_05915 (dnaE)
Enzymes [BR:
thaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAG895_05915 (dnaE)
DNA replication proteins [BR:
thaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAG895_05915 (dnaE)
DNA repair and recombination proteins [BR:
thaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAG895_05915 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XAO88810
LinkDB
All DBs
Position
1324882..1328406
Genome browser
AA seq
1174 aa
AA seq
DB search
MTSAALTPAEPGPVPSAPRFVHLRLHSEYSITDGIVQLDQAIAAAAADGMPALGMSDLAN
LFGMVKFYKGARGKGIKPIVGVDAWIQNEVERDKPQRVLLICRNRAGYGQLCELLTRAYL
DNKHRGRAEMRRAWFEGGAASELLCLSGAMSGDVGAAIAAGNLALAEQLAADWARLFPDA
FYIEIQRAGHPGTETYIRHAVDIAGRLGLPVVATHPVQFLKREDFKAHEARVCIAQGYVL
ADKRRPRDFTEEQYLKSQAEMCELFADLPEALENAVEIARRCSLTVQLGKNFLPLFPTPE
GMTLDDFLVAEAKAGLERRLAQLYPHPEEREKQRPRYEERLKFETDTIIQMGFPGYFLIV
ADFIRWGKKNGVPVGPGRGSGAGSLVAYSLDITDLDPLEYALLFERFLNPERVSMPDFDI
DFCQDNRYRVIEYVRERYGKDAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIP
IEGAKPVSLNKAYEMEPQIGEMMADGNDGESVRDLWSLAQPLEGLSRNVGMHAGGVLIAP
GKLTDFCPLYIADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELALEYVARLEGS
RPDLMSLGFEDPAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGP
LGSGMVDDFILRKKGQQEIDYFHPDLKACLEPTYGVIVYQEQVMQISQIIGGYTLGGADM
LRRAMGKKKADEMAKHRATIAEGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVV
TYHTAWLKAHHCAAFMAATMSSDLDNTDTVKIFYEDTLANGIKVLPPDVNTSDYRFVPVD
RKTIRYGLGAVKGVGEPAVRAILAARQKGGDFRDLFDFCERVDRRMVNRRVIEALIRAGA
MDTLAGHKGLDRAQLMATVALAMEAAEQAAANAMQGGLFDLMPEAAGAAPEFARVRAWSE
RERLKEEKLAIGFFLSGHPFNAFKPEVRRFVRRTLAQLEPSRDLTTLAGVVMEQRTKVGN
RGKMAFVQIDDGTEPREVTVYSEVLDASRGKIVTDEVVVVEAKVSNDDFSGGLRIIADRI
LTLGEARSRFARALQLRINGEVAASGGAVSAAGKLQTLLEPFREGGCPIRVSYRNASAEA
ELPLGDEWRVRLEDALLEGLREWLPPEAVEVLYP
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgcagcccttaccccggccgagccgggcccggtgcccagcgcgccgcgcttc
gttcaccttcgtctccattccgaatactcgatcaccgacggcatcgtccagctcgatcag
gcgatcgccgccgccgccgccgatggcatgccggcgctcggcatgtccgacctcgccaac
ctgttcggcatggtcaagttctacaagggcgcgcgtggcaagggcatcaagcccatcgtc
ggcgtggacgcctggatccagaacgaggtcgagcgcgacaagccgcagcgcgtgctgctg
atctgccgcaaccgcgccggctacggccagctctgcgaactgctcacgcgcgcctacctc
gacaacaagcaccgcggtcgcgccgagatgcgtcgcgcgtggttcgagggcggcgcagcg
agcgagctgctgtgcctgtcgggcgcgatgagcggcgacgtcggcgcggcgatcgccgcc
ggcaacctcgcgctcgccgagcagctcgccgccgactgggcgcgcctcttcccggacgcc
ttctacatcgagatccagcgcgccggccaccccggcaccgagacctacatccggcacgcg
gtggacatcgccgggcggctcggtctgccggtggtggcgacgcacccggtgcagttcctc
aagcgcgaggacttcaaggcgcatgaggcgcgggtgtgcatcgcccagggctacgtgctg
gccgacaagcgccggccgcgcgacttcaccgaggagcagtacctcaagagccaggcggag
atgtgcgaactcttcgccgacctgcccgaagcgctcgagaacgcggtcgagatcgcccgc
cgttgctcgcttaccgtgcagctgggcaagaacttcctgccgctgttcccgaccccggaa
ggcatgacgctggacgacttcctggtggcggaggccaaggccggtctcgagcgccgcctc
gcccagctctacccccaccccgaggagcgcgaaaagcagcgcccgcgttacgaggaacgg
ctcaagttcgagaccgacaccatcatccagatgggcttcccgggctacttcctgatcgtg
gccgacttcatccgctgggggaagaagaacggcgtgccggtcggcccgggccgcggctcg
ggtgccggctcgctggtggcctactcgctcgacatcaccgacctcgacccgctcgaatac
gcgctgctgttcgagcgcttcctgaacccggagcgggtgtcgatgcccgacttcgacatc
gacttctgccaggacaaccgctaccgcgtcatcgagtacgtgcgcgagcgctacggcaag
gacgcggtgagccagatcgccaccttcggcaccatggcctcgaaggcggtggtgcgcgac
gtcggccgcgtgctcgacctgccctacggcctgtgcgaccggctgtcgaagctgatcccg
atcgagggcgccaagcccgtctcgctgaacaaggcctacgagatggagccgcagatcggc
gagatgatggccgacggcaacgacggcgagtcggtgcgcgacctgtggagcctggcgcag
ccgctcgagggcttgagccgcaacgtcggcatgcacgccggcggtgtgctgatcgcgccc
ggcaagctcaccgacttctgcccgctctacatcgccgacggcgacgacgccacgccggtg
tcgcagttcgacaaggacgacgtcgaggccgtgggcctggtgaagttcgacttcctcggc
ctgcgcaacctcaccatcatcgagctcgcgctggagtacgtggcgcgtctggagggcagc
cggcccgacctgatgagtctgggcttcgaggaccccgccgcctaccagatcctgaaggac
gccaacaccacggcgatcttccaggtcgaatcggacggcatgaagaagctgctgaagaag
ctcgcgcccgaccgcttcgaggacatcatcgcggtgctcgcgctctaccgtcccggtccg
ctcggctcgggaatggtggacgacttcatcctgcgcaagaagggccagcaggagatcgac
tacttccaccccgacctcaaggcctgcctggagccgacctacggcgtcatcgtgtaccag
gaacaggtgatgcagatctcccagatcatcgggggctacacgctgggcggcgccgacatg
ctgcgccgcgcgatgggcaagaagaaggccgacgagatggccaagcaccgcgccaccatc
gccgagggcgcgaagcagaagggctacgacccggcgctcgccgagcagctcttcgacctg
atgaccaagttcgcggagtacggcttcaacaagtcgcacaccgcggcctacgcggtggtc
acctaccacaccgcctggctcaaggcgcaccactgcgcggccttcatggcggcgacgatg
tcgtccgacctggacaacaccgacacggtcaagatcttctacgaggacacgctcgccaac
ggcatcaaggtgctgccgccggatgtgaacacctccgactaccgcttcgtgccggtggat
cgcaagaccatccgctacggcctgggcgcggtgaagggcgtgggcgagccggcggtgcgg
gcgatcctcgccgcgcggcagaagggcggagacttccgcgacctgttcgacttctgcgag
cgggtggaccggcgcatggtgaaccgccgcgtcatcgaggcgctgatccgcgccggcgcg
atggatacgctggcgggccacaagggcctggaccgcgcgcagctgatggcgaccgtggcc
ttggcgatggaggcggccgagcaggcggcggccaacgcgatgcagggcgggctcttcgac
ctgatgcccgaggctgcgggcgcggcgccggagttcgccagggtgagggcgtggagcgag
cgcgagcgcctcaaggaagagaagctcgcgatcggcttcttcctctccggccaccccttc
aacgccttcaagcccgaggtgcgccgcttcgtgcgccgcacgctggcccagctcgagccc
tcgcgcgacctcaccacgctggccggggtggtcatggagcagcgcaccaaggtcggcaac
cgcggcaagatggccttcgtgcagatcgatgacgggaccgagccgcgcgaggtgacggtg
tactccgaggtgcttgacgccagccgcggcaagatcgtcaccgacgaggtcgtcgtggtc
gaggccaaggtcagcaacgacgacttctcgggtgggctgcgcatcatcgccgaccgcatc
ctcacgctgggcgaggcgcgcagccgcttcgcgcgcgccctgcaactgcgcatcaacggc
gaagtggccgcgagcggcggcgcggtgagtgccgccggcaagctgcagaccctgctcgag
cccttccgcgaagggggttgcccgatccgggtcagctaccgcaatgcgagtgcggaggcc
gaactgcccctgggcgacgaatggcgggtgcgactcgaggatgccctgctcgagggcctg
cgcgagtggctgccgccggaagcggtcgaggtgctctacccctga
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