Thauera sp. JM12B12: AAG895_06535
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Entry
AAG895_06535 CDS
T11674
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
thaj Thauera sp. JM12B12
Pathway
thaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAG895_06535 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thaj03021
]
AAG895_06535 (rho)
03019 Messenger RNA biogenesis [BR:
thaj03019
]
AAG895_06535 (rho)
Transcription machinery [BR:
thaj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AAG895_06535 (rho)
Messenger RNA biogenesis [BR:
thaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAG895_06535 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
Mor
NACHT
AAA
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XAO89465
LinkDB
All DBs
Position
complement(1472920..1474137)
Genome browser
AA seq
405 aa
AA seq
DB search
MAMDAGVEGANRLRKQELVFALLRNRARRGEPICGDGALEVLPDGFGFLRSPDTSYLAGT
DDIYVSPSQIRRFNLRTGDTIEGEIRTPKDGERYFALTKLDKINGRPPEECKSKILFENL
TPLHPQECLKLERDVRGEENITSRVIDMIAPIGKGQRGLLVAPPKSGKTVMLQHIAHAIT
ANHPDVKLIVLLIDERPEEVTEMLRSVKGEVVASTFDEPATRHVQVAEMVIEKAKRLTEH
KYDVVILLDSLTRLARAYNTVVPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTII
ATTLVDTGSRMDDVIYEEFKGTGNMELHLDRRMAEKRVYPAINVNRSGTRREELLLKADV
LQKVWILRKLLYGMDDIDAMEFLLDKIKATKSNAEFFDAMRSGRG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggacgccggcgtcgagggtgcgaacaggctgcgcaagcaggaactcgtcttc
gcgctgctgcgcaaccgtgcccgcaggggcgaaccgatctgtggcgacggcgcactcgaa
gtgctgcctgacggtttcggcttcctgcgctctcccgacacctcgtatctcgcggggacg
gacgacatctacgtgtcgccctcgcagatccggcgcttcaacctgcgtaccggcgacacg
atcgagggcgagatccgcacgcccaaggacggcgaacgctacttcgcgctcaccaagctc
gacaagatcaatggtcggcccccggaagagtgcaagagcaagatcctgttcgagaacctc
acgccgctgcatccgcaggagtgcctgaagctcgagcgcgacgtccgcggcgaggagaac
atcaccagccgcgtgatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctc
gtcgccccgcccaagagcggcaagacggtcatgctgcagcacatcgcgcacgcgatcacg
gccaatcatccggacgtcaagctgatcgtgctgctgatcgacgagcgcccggaagaagtg
acggagatgctgcgttcggtgaagggcgaggtcgtggcctccaccttcgacgagccggcg
acccgccacgtgcaggtcgccgagatggtgatcgagaaggccaagcgcctgaccgagcac
aagtacgacgtggtgatcctgctcgactcgctgacgcggctggcgcgcgcctacaacacc
gtggtgccggcctccggcaaggtgctgaccggcggcgtggatgccaacgccctgcagaag
cccaagcgcttcttcggcgccgcgcgcaacatcgaggaaggcggctcgctgaccatcatc
gccaccacgctggtcgacaccggcagccgcatggacgacgtgatctacgaggagttcaag
ggcaccggcaacatggagctccacctcgaccgccgcatggccgagaagcgcgtctatccg
gcgatcaacgtcaatcgctcgggcacccggcgcgaagagctgctgctcaaggccgacgta
ctgcagaaggtgtggatcctgcgcaagctgctctacggcatggacgacatcgacgcgatg
gaattcctgctcgacaagatcaaggccaccaagagcaacgccgagttcttcgacgcgatg
cgctcgggtcgcggctga
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