Thauera sp. JM12B12: AAG895_17635
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Entry
AAG895_17635 CDS
T11674
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
thaj Thauera sp. JM12B12
Pathway
thaj00300
Lysine biosynthesis
thaj00470
D-Amino acid metabolism
thaj01100
Metabolic pathways
thaj01110
Biosynthesis of secondary metabolites
thaj01120
Microbial metabolism in diverse environments
thaj01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
thaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AAG895_17635 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AAG895_17635 (dapF)
Enzymes [BR:
thaj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AAG895_17635 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XAO87432
LinkDB
All DBs
Position
complement(3880848..3881681)
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AA seq
277 aa
AA seq
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MKLRFTKMHGLGNDFVVIDATRTPVELTPERVRTIADRHFGVGCDQLLVVEPASRPDVDF
RYRIFNADGGEVEQCGNGARCFVRFVHDKGLSAKDEIRVETKSGLIAPRLRADGLVTVDM
GVPELEPAKIPFVSDSDAVVQPLQVGARTVAITAVSMGNPHAVQVVADVDAAPVAEEGAL
IERHARFPARVNAGFLQVVDVHEARLRVFERGAGETLACGTGACAAVVAGILRGLLETPV
RVHTRGGELEIAWEGPGAPVRMTGPAVTVFEGEIELA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgcttcaccaagatgcacggcctcggcaacgatttcgtcgtcatcgacgcc
acccgcacaccggtcgagctgaccccggagcgggtcaggacgatcgccgaccgccacttc
ggcgtcggctgcgaccagctgctggtggtcgagccggcctcccgcccggacgtcgatttc
cgctaccgcatcttcaatgccgacggcggcgaggtcgagcagtgcggcaatggcgcgcgc
tgcttcgtgcgcttcgtgcatgacaagggcctgagcgcgaaggacgagatccgcgtcgag
acgaagtccggcctcatcgcgccgcgcctgcgcgccgacggcctggtcaccgtggacatg
ggcgtgccggagctggagccggcgaagatccccttcgtgtccgactccgatgccgtggtg
cagccgctgcaggtcggcgcgcgcacggtggcgatcaccgcggtgtcgatgggcaacccg
cacgcggtgcaggtcgtggccgacgtcgatgccgcgccggtggccgaggagggcgcgctg
atcgagcgccacgcgcgcttcccggcgcgcgtcaatgccggcttcctgcaggtggtggat
gtgcacgaggcgcgcctgcgcgtgttcgagcgtggcgccggcgagacgctcgcctgcggc
accggtgcctgcgcggcggtggttgcgggcatcctgcgcggtctgctggagacgccggtg
cgggtgcacacccgcggcggtgagctggagatcgcctgggagggaccgggcgcgccggtg
cgcatgacggggccggcggtcaccgttttcgagggcgagatcgagctcgcctga
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