Candidatus Endolissoclinum faulkneri L2: A1OE_1025
Help
Entry
A1OE_1025 CDS
T02365
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Pathway
thal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1OE_1025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thal03019
]
A1OE_1025
Enzymes [BR:
thal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A1OE_1025
Messenger RNA biogenesis [BR:
thal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A1OE_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
AAA_19
DUF1639
Motif
Other DBs
NCBI-ProteinID:
AFX99204
UniProt:
K7YRM5
LinkDB
All DBs
Position
complement(944712..946193)
Genome browser
AA seq
493 aa
AA seq
DB search
MKSERYHLTNFNALGLAKAVIQAVLSEGYDAPTPIQVKAIPLILEGRDVVAVAQTGTGKT
AAFLLPLLSKLDQAGRIAKPKCTRVLVLSPTRELATQIHKAVLIYGKKLHLRSTVIIGGA
KSCVQIRKCAPGVDFLVATPGRLLDHIRSGTIDLGNTEVVVLDEADQMLDLGFMPAVRNI
LAMTPKKRQTLLFAATMSAQIRALAKDFLTNVSEIAVAPASIPIELIRESVVQVSRSSKS
KALIKILSDVTVKRAIVFTRTKRGADHIARCLSNAGFASEAIHGNKTHAQRECVLNTFKT
GKSKILVATDVVARGINVIGVTHVVNYELPIVPESYVHRIGRTGRAGAEGVAISLVDDGE
MELLTAIERLIGRSLVADKTVDFCTRRSRFTRSAEKEVKYDRHRCISNLRRVHDKNYLKQ
QIFDESYQKQPTNKGVNRSKYALKKGKRQKKLNDKNSQIKQSLSKKEINSGIVRFAGRKP
PQRQRTGIPFSGT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaaagatatcatttgactaactttaatgctctcggtttggctaaggctgta
attcaggctgttttgtccgaaggatatgacgcaccaacccctatacaagttaaagctata
cccttgattcttgaggggcgcgacgttgttgctgttgcacagacaggcacaggcaagact
gctgcttttcttttacccttgctcagtaagctggatcaagctggtcgtatagcaaaacca
aaatgcactagagtattagtactttctccaactcgcgaactagcaactcagatccataaa
gctgttttgatctatggtaaaaaattacatctgcgctccactgttattattggtggtgca
aagtcttgcgtgcaaattcgcaaatgtgccccaggggttgattttttggtagctacgcca
ggtcgattgcttgatcatattaggtcaggtactatagatcttggcaatactgaggttgtt
gtgttggatgaggcagaccaaatgttggatttgggttttatgccagccgtacgcaatata
ttagcaatgacaccgaagaaacggcagacgttgttattcgctgcaactatgtctgctcag
attcgtgctttggctaaggactttttgaccaatgtctctgagatagcagtagcgccagct
tctattccaattgagctaatccgcgagagtgttgtgcaagtatctcgctccagtaaaagt
aaagcgctaatcaagatattatcagatgttacggttaaacgtgccattgtttttacacga
actaagcgaggtgctgatcatatcgctcgatgtttgagcaatgctggttttgcaagtgaa
gctattcatggtaacaaaacccatgctcagcgagagtgtgtactgaatacttttaaaaca
ggtaaatcgaaaatattagttgcaacggatgttgttgctcgtggtattaatgtcattggt
gtgactcatgtagtgaactatgaattacctattgtcccagaaagttatgttcatcgaatc
ggtcgtacaggtcgagctggcgcggagggtgttgctatatctttagtagatgatggagaa
atggaattgcttactgctatagagcgccttattggtcgatctcttgttgctgacaaaact
gttgatttttgcacgcgaagatcgcgttttactagatctgctgaaaaagaagtaaagtac
gatcgtcaccgctgtattagtaatttacgacgagtccatgataagaattatctgaaacaa
caaatttttgatgaaagttatcagaaacagcctacaaataagggcgttaatcgatcgaaa
tatgccctcaaaaaaggtaagcgccagaagaagctaaatgacaaaaattcccagataaag
caatccttgagcaagaaggagattaattctgggattgttcgatttgctggtcgcaaacca
ccgcagcggcaaaggacaggaattccattctccggaacctga
DBGET
integrated database retrieval system
