Candidatus Endolissoclinum faulkneri L2: A1OE_211
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Entry
A1OE_211 CDS
T02365
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Pathway
thal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A1OE_211 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thal03021
]
A1OE_211 (rpoA)
03400 DNA repair and recombination proteins [BR:
thal03400
]
A1OE_211 (rpoA)
Enzymes [BR:
thal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A1OE_211 (rpoA)
Transcription machinery [BR:
thal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A1OE_211 (rpoA)
DNA repair and recombination proteins [BR:
thal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A1OE_211 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AFX98413
UniProt:
K7Z379
LinkDB
All DBs
Position
complement(207453..208469)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWLTLIKPKKLDFQAGYDAKRKKTIVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
AVQIDGVVQEFSSIPGVREDVTDIVLNLKAVAIRMYGESQKKMRLKAKGPGEVKAGHIDA
ISDIEIMNPDHTICTLDRNASLSMELTVANGKGYVPASASRQEDTQIGLIPIDAIFSPVR
QVAYKVENTRVGQVTDYDKLSITVETDGSLNPDDSIAYAARILQDQLQLFINFEEPVQRS
KTEETNDLPFNKNLLRKVEELELSVRSANCLKNDNIVYIGELVQTTEPELLRTPNFGRKS
LNEIKEVLNSLGLSLGMKITAWPPENIDELAKRLEEPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatacaaaaaaattggctgacgttaattaagcccaagaagcttgatttccaagcgggc
tacgatgctaaacgcaaaaaaactattgttgcagagccgttggagcgtggatttggttta
acgcttggtaacgctttgcgtcgagtgcttctttcatctttgcagggagccgcaataact
gcagttcaaattgacggtgtagttcaagagttctccagtatacctggtgttcgtgaagat
gtaactgatatagttttaaatcttaaagcagttgctatccgcatgtatggagaaagccaa
aaaaaaatgcgcctaaaggctaagggaccaggagaagtaaaggcaggtcatattgatgca
atatcagatattgagattatgaatcctgatcatacaatctgcactttggatcgtaatgct
tctttatctatggaattaactgtagcgaatggtaaaggatatgttccggcttcagctagt
cgtcaggaagatacacaaattggtctaataccgattgatgctatttttagcccagtacgt
caagtagcttacaaagtggaaaatactcgagtaggtcaagtaacagactacgataagcta
tctattacagttgaaactgatggttcgttaaatccagatgattctatagcttatgctgct
cgtattttgcaagaccaactacaactttttataaactttgaagagccagttcaacgtagc
aaaacggaagaaactaacgatctaccatttaacaaaaacctgctacgtaaggtagaagaa
ttagagctttcggtccgttcggcaaattgcttgaaaaatgataatatcgtttatattggt
gaattagttcaaacaactgagccagaactgcttcgtactccaaattttggtcgtaagtct
ctgaatgagattaaggaagtgctaaattctttaggtctttcacttggtatgaaaattact
gcttggcctccagaaaatatagatgagctggctaagagattggaagaaccattctaa
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