Candidatus Endolissoclinum faulkneri L2: A1OE_4
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Entry
A1OE_4 CDS
T02365
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Pathway
thal03030
DNA replication
thal03430
Mismatch repair
thal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1OE_4 (dnaQ)
03430 Mismatch repair
A1OE_4 (dnaQ)
03440 Homologous recombination
A1OE_4 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thal03032
]
A1OE_4 (dnaQ)
03400 DNA repair and recombination proteins [BR:
thal03400
]
A1OE_4 (dnaQ)
Enzymes [BR:
thal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1OE_4 (dnaQ)
DNA replication proteins [BR:
thal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1OE_4 (dnaQ)
DNA repair and recombination proteins [BR:
thal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1OE_4 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AFX98219
UniProt:
K7YNM4
LinkDB
All DBs
Position
2479..3177
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AA seq
232 aa
AA seq
DB search
MREIVLDTETTGLNPENGDRIVEIGCLELINHIPSGHTLHYYFNPERDIPEETFRVHGLS
SDFLVEYPVFAKLADKILDFLGDAILIMHNASFDMKFLNNELRLVGIPQIPISRALDTCA
MARRKYPGAHVSLDALCRRFDIDNSNRDYHGALIDANLLASVYLELIGGSQPDLIANLSN
KSSNLSTTSNTPELIEKNNVVHRNPRPHIPSGDEITAHNAFLQRIKNPIWTN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaattgtacttgataccgaaacaacggggttaaacccagaaaatggggatcga
atcgttgagataggttgtttagagctgattaatcatattcctagcgggcataccctacat
tattactttaatccagaacgcgatattccagaggaaacgtttcgcgttcatggtttgtct
tctgactttttagtcgaatatccagtttttgcgaaattagctgataaaattctagatttt
ttaggtgatgcaatattgattatgcataatgcaagttttgacatgaaatttttaaacaat
gaattgcggcttgtgggtattccacaaataccgataagtcgagcgctggatacttgtgct
atggctaggagaaaatatcctggtgctcatgttagcttagatgctttgtgtcgtcgtttt
gacattgacaattcaaaccgtgattatcatggcgctttaattgatgcaaatcttttagct
tctgtttatttagaattgattggtggaagtcagccagatttgattgcaaacttatctaat
aaatctagtaatttatctacaacttctaatactccagaacttattgaaaaaaataacgtt
gttcatcgaaatcctcgtcctcatattccaagtggtgatgagataacagcgcataatgca
tttttacagcgaatcaaaaaccctatttggacaaattaa
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