Candidatus Endolissoclinum faulkneri L2: A1OE_733
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Entry
A1OE_733 CDS
T02365
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Pathway
thal03030
DNA replication
thal03430
Mismatch repair
thal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1OE_733 (dnaX)
03430 Mismatch repair
A1OE_733 (dnaX)
03440 Homologous recombination
A1OE_733 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thal03032
]
A1OE_733 (dnaX)
03400 DNA repair and recombination proteins [BR:
thal03400
]
A1OE_733 (dnaX)
Enzymes [BR:
thal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1OE_733 (dnaX)
DNA replication proteins [BR:
thal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1OE_733 (dnaX)
DNA repair and recombination proteins [BR:
thal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1OE_733 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_19
RuvB_N
AAA_2
AAA_14
AAA_5
AAA_30
AAA_18
AAA_16
nSTAND3
DNA_pol3_delta_C
DEAD
SRP54
AAA_assoc_2
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
AFX98920
UniProt:
K7YH98
LinkDB
All DBs
Position
complement(679647..681500)
Genome browser
AA seq
617 aa
AA seq
DB search
MDNSSSIGLNPVLSEYLILARKYRPQTFDDLIGQDLLVRTLRNACKHNRIHHAFMLFGVR
GVGKTTTARIIAKSLNCIGQNIHDRLGMQPCIICHNCRAIAEGRHVDVLEMDAASHTGVE
DIRQLIENARYRPVVGRYKVYIIDEVHMLSKNAFNALLKTLEEPPQHVKFIFATTEIRKV
PTTILSRCQQFNLRRISINLLIKLFEKICYNEKVEAELDALKLIAHAADGSARDGISLLD
QAIALNANLITVDEIRYMLGLVDRIQIYEMYRAIMGGKTLNALNILSELYDKGTDPVIII
QELMEVTHIITCMKIAPKGAMNSNLSEVDREEGMALAKVMKMSSLTLAWQMFAKGISEVQ
ASPLAIAAAEMLIIRIAYSAELPDPIDLIRAIRDRKILPADTSCGTTKTHTTLSPAALPS
IPIETVDVLDQMPSSIAAGCNRSNFDNLNCEMTQYVENFMSDSSLADLHSDKKILTYNSN
KLFDPMPVDFAGVAKLVFQKGEAVLGNTLVTNVHPVVVEPGRLKLRPQGSIDHHHIFKLL
TQHLQGWTGQKWVIEISNEKGNPTIMEQNSAQVTAIQTELIGYPLIAKVLELFPGAKIDN
MIDFIAPAIVGRDAFVN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcctcgtcaatcggattaaatcctgtattgagtgaatacctgattttagca
cgtaagtacagacctcaaacgtttgatgaccttataggtcaagatctgttagtgcgtact
ttacgcaatgcgtgcaaacataatcgcatacaccatgcctttatgttatttggtgtgcgt
ggagttggtaaaactacaactgctagaattatcgctaaaagcttaaattgtataggtcag
aatatccatgatcggctaggaatgcagccttgtattatttgccataattgccgcgctatt
gctgaaggcagacatgtagacgtgttagaaatggacgcagcatctcatactggtgtagag
gatatacgccagctgatagaaaatgcaaggtatcgtcctgtagtaggtcgttataaagtt
tatatcatagacgaagttcatatgctgtccaaaaatgcttttaacgcgttgttaaaaaca
ttggaagagccacctcaacacgtaaaatttatctttgctactacggaaattcgtaaggtt
ccaactacgattttatcacgctgtcagcaatttaatttacgcaggataagcattaatctg
ttaataaaattatttgaaaagatttgctataatgaaaaagttgaggcagaattggatgcg
ttaaaattaatagctcatgctgccgacggatcggctcgtgacggtatatcgctcctagat
caggctatcgcactcaacgctaatttaatcacggttgatgagatccgttatatgcttggt
ttagttgaccgtatacaaatttatgaaatgtatcgagcaattatgggtggtaaaacttta
aatgcccttaatattttatccgagttgtatgacaaaggaactgacccggttataataatt
caggaactaatggaggtgacccatattattacttgcatgaaaattgctcctaagggagcg
atgaatagcaatctaagtgaagtggatagagaagaaggtatggctttagcaaaggtgatg
aagatgtcgtcactgactctggcttggcaaatgtttgcaaagggaattagcgaggttcaa
gcatcccctctggcaattgccgcagcagagatgcttattattcgtattgcttatagtgct
gaattacctgatccaattgatctgatacgggcgatacgcgatagaaaaatcttgcctgca
gatacttcatgcggaactacaaaaacacacactactttatcaccagccgctttaccatct
atacctattgaaacagtcgatgtgttagatcaaatgcctagcagcattgctgctgggtgc
aacagaagtaattttgataacttaaattgcgaaatgacacaatatgtcgaaaattttatg
tcagattctagcttagctgatttacattctgacaaaaaaatactaacttacaattcaaat
aaactgtttgacccaatgcctgtcgactttgctggagtggcgaaattagtatttcaaaaa
ggtgaggcggttttgggaaatacattagttactaatgtgcatccggttgttgttgagcca
ggtcgcttaaagcttcgtccacagggaagtatcgaccatcatcatatttttaaattgctt
actcaacatttgcaaggttggactgggcagaagtgggtgatcgaaatttctaacgaaaaa
ggtaaccctacaataatggagcagaattcagcacaggtaactgctatacagactgaactt
ataggttacccactaattgctaaggtattagaattgttccccggtgcgaaaatagacaat
atgatagattttattgcaccggcaatagtaggaagagatgcttttgtaaattga
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