Candidatus Endolissoclinum faulkneri L2: A1OE_934
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Entry
A1OE_934 CDS
T02365
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Pathway
thal03030
DNA replication
thal03430
Mismatch repair
thal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1OE_934 (dnaE)
03430 Mismatch repair
A1OE_934 (dnaE)
03440 Homologous recombination
A1OE_934 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thal03032
]
A1OE_934 (dnaE)
03400 DNA repair and recombination proteins [BR:
thal03400
]
A1OE_934 (dnaE)
Enzymes [BR:
thal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1OE_934 (dnaE)
DNA replication proteins [BR:
thal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1OE_934 (dnaE)
DNA repair and recombination proteins [BR:
thal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1OE_934 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
GHMP_kinases_N
GABP-alpha
Motif
Other DBs
NCBI-ProteinID:
AFX99117
UniProt:
K7YNK9
LinkDB
All DBs
Position
858756..862229
Genome browser
AA seq
1157 aa
AA seq
DB search
MAEGAIHLSEIVKLAKQNAMPAVAITDTSNMFGALEFSVTASNQGVQPIIGVQLNIRRTI
DTELAGLYEVSNCNNLPDQLPLIAQNETGYSNLMNLVSQAFLNTTGNDTPLISLDEMEGR
TDGVIALTGGIKGSLGRLLLAKEGKSKAEAILTRLETLFPNRLYIELQRHFIEEERQIEK
YLINLAYARNLPLVATNDVFFADQDMYEAQDVLLCIAQGTTISDLKRWQITPHHRFKSAE
EMHQLFVDLPEAINNTLVIARRCAVMSEKTAPILPRFETKDDRTEAEELRIQASDGLENR
LNAYVYTPEMNATNREKIAIPYRKRLNMELTIIEQMGFPGYFLIVSDFIKWAKSKKIPVG
PGRGSGASSLVAYSLLITDLNPLRWGLLFERFLNPERVSMPDFDIDFCQDRRDEVIHYVQ
KKYGRECVAQIITFGKLQARAALRDVGRVLEIPYSRVNHICKLVPNNPNNPVTLKQALQN
EKELQAQSADDINVANLIKIALKLEGLYRNASTHAAGIVIGNKPLNNLVPLYRDPRSDML
VTQFNMKWIEQAGLVKFDFLGLKTLTVLKLAVDLLKERRVEIDLSQIPLNDKHTYSILTK
GDSIGVFQLESSGMRDVLRRMRPDRFEDIVALVALYRPGPMANIEKYIACKHGEEQPDYM
HPILEPVLKETFGIMIYQEQVQQAAQLLSGYTLGAADLLRRAMSKKIKEEMDAQRDKFIR
GATANGVRKNQSNRIFDQIAAFAGYGFNKSHAVAYAMISYQTAYLKANYPVEFLAASMTY
EINNTDKLNVLRQELNNLNIKLLPPDINRSRENFSVEKLEDDRYGIRYALAAIKNVGISA
MKLLVYLRDKDGPFKNIVDFVYRINPNQVNKRLMENLIRAGTFDELHNNRAELFENINTI
MLRLNLAANERNSEQISLFSIEKDWALQQQILPKSRPDWPSMDRLREEFAALGFYLSANP
LDSYAQNLTKMKVTSSSEAYSETLCRGGKTQLTMAGIVIGRQIRTSKFGKHFANIQFTDS
KGLFELIMFSKLLGTSQDLLDSGEPLLIHTNARIKDNKLQLSASSIKLLNQVMEQITSGI
EIFLSNSSSLKQIKQLIQKEVKGSGRVYIIIQTSRGNVRIKLPESYHASSELLNVIKDMS
GIKHTADLSSNNIDCHR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggagcgattcatctcagcgagattgtaaaacttgccaagcaaaatgctatg
ccagctgtcgccataacggatactagcaatatgtttggagcattggaattttctgtaaca
gcttctaaccaaggcgtacagccaataataggagtacagcttaacattcgccgaacaata
gatacggaattagcaggcctgtatgaagtcagcaattgtaataatttaccagaccaacta
ccgttgattgcccaaaacgaaaccggctattctaatttaatgaatctggtaagtcaggcc
tttctcaatactacaggaaatgacactccgctgatttcccttgatgaaatggaaggacgt
accgatggtgtgattgcactaacaggaggcataaaaggtagtttaggtcgcttactatta
gctaaagaaggcaaaagcaaagcggaggctatacttacacgtttagagacactttttcct
aatagactttacatcgagctgcagcgccatttcattgaagaagaacgccaaatagaaaag
tatctgattaatttagcatatgctcgtaatcttcctttggtagctaccaacgacgtattc
tttgctgaccaagatatgtatgaagcacaagatgttcttctatgtatagcacaaggcaca
acaattagcgatttaaaacgctggcaaattactccacatcatcgcttcaaaagcgctgag
gaaatgcatcaactatttgttgatttaccagaagcaattaataatactctagtaatcgca
agacgctgcgcggtaatgtcggagaagactgcacccatactaccacgatttgaaacgaaa
gatgatagaactgaagcggaggagttacgcatacaagcgagtgatggtctagaaaaccgc
ttaaatgcttatgtttatactccagaaatgaatgctactaatcgagaaaaaatagcaatt
ccttaccgcaagcgactcaatatggaattaacgattatcgaacaaatgggattcccaggg
tattttcttatcgtatcggacttcataaaatgggctaagtcaaaaaagatccctgttggt
cctggacgcgggtcaggagcaagttcactcgttgcttattctttactaattactgactta
aacccgttgcggtggggattactatttgagcgcttccttaatccagaacgcgtatcaatg
ccagactttgatatcgacttctgccaagatcgtcgtgatgaagtaattcactatgtgcag
aaaaaatatggccgagaatgtgttgcacaaattatcacttttgggaaacttcaagctcgt
gcagctttacgcgacgtcggacgtgtacttgaaatcccttatagccgggtaaatcatatt
tgcaagttagtaccaaacaatcctaataatccagtcaccttgaaacaagcactgcaaaat
gaaaaagaacttcaagcgcaaagtgcagatgatataaatgtcgctaatttgattaagatt
gctctaaagttggaaggactatatcgcaatgcatctacgcatgctgctggcatagtaata
ggcaacaagccgttaaacaatctagtacctctctatcgtgatccacgctcagatatgtta
gttacccagtttaacatgaaatggatagagcaagctggtcttgtaaagtttgatttttta
ggtttgaagactctaacggtactcaagttagccgttgacctattaaaagagcgaagagta
gaaatcgacctatctcaaattcctcttaacgataaacacacttattctatattaaccaag
ggcgatagcattggcgtatttcaattagaaagttcaggaatgcgcgatgtgttacgccgc
atgcgtcctgataggtttgaagacatcgttgcgctagttgccttgtatcgacctggacca
atggcaaacatagaaaaatatatcgcctgtaagcacggcgaggaacagccagattacatg
catcctattttggagccagtacttaaggaaacttttggcataatgatttatcaagagcaa
gttcaacaagctgctcagctactctctggctataccctcggtgctgcagacttgttacgt
cgagccatgagtaaaaagattaaggaagaaatggatgctcaacgtgataaatttattagg
ggagcaactgcaaatggagtaagaaaaaaccagtctaaccgtatttttgatcaaatcgct
gcttttgcaggatacggttttaacaaatctcatgccgtggcttatgctatgattagttac
caaactgcttatctaaaagctaattatccagttgagtttctagcagcatcaatgacctat
gaaattaataatacagataaactaaacgtattgcgtcaagaattaaacaatcttaatata
aaattactgcctccagacattaataggtcacgcgagaatttttcagtcgaaaagcttgaa
gatgatagatatggtattcgttatgctcttgctgcaataaaaaacgttggtatttcagcg
atgaaattactagtgtatttacgagacaaagacggacccttcaaaaatatagtagatttt
gtttatcgtattaaccccaatcaagtaaacaagcgtcttatggaaaatttaatccgcgcc
ggaacttttgatgaactacataacaatcgtgcagaattatttgagaatattaataccatt
atgctacgcctaaacttagcagcaaatgagcgaaattctgagcaaataagtctttttagc
atcgaaaaagattgggcattgcaacagcaaattttacctaaaagcagaccagactggcca
agcatggatcgattacgggaagaatttgctgcactcggattttatctctcagctaatccg
ttagattcttatgcacaaaatttaactaagatgaaagtgacctcttctagcgaagcatat
tcagagactctctgtagaggtggaaagacacaactgacgatggctggaatagtcattggt
agacaaatccgcacttctaagtttggcaaacatttcgcaaacatacaatttactgatagt
aaaggtttatttgagttaatcatgttttcaaagctacttggtacatcacaagatttatta
gattcaggagaaccactactgattcatactaacgcaagaattaaagacaacaagttgcaa
ctatcagcctcctcaataaaactactaaatcaggtaatggaacagataacatccggaata
gaaatttttctcagtaacagttcatctctaaaacagatcaagcagttgatacaaaaagaa
gtaaagggatctgggcgtgtctatattattatccaaactagccgcggtaacgtacgcatc
aaattaccagaaagttatcacgcgtccagcgaactgcttaacgttattaaagatatgtcg
ggcatcaaacatacagcggatctttcatcaaacaatatcgattgtcatcgctaa
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