Thermobifida halotolerans: NI17_000210
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Entry
NI17_000210 CDS
T08032
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thao03036
]
NI17_000210 (smc)
Chromosome and associated proteins [BR:
thao03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NI17_000210 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UOE19735
UniProt:
A0AA97M483
LinkDB
All DBs
Position
39180..42728
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AA seq
1182 aa
AA seq
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MYLKTLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSSRAPLGRAEVSLTIDNTDGALPIDYSEVTIRRTMFRNGGSEYAINGDTCR
LLDIQELLSDSGIGREMHVIVGQGQLDTVLHAGPEERRALIEEAAGILKHRKRKEKALRK
LSAMQSNLDRVSDLTAELRRQLKPLGRQAELARRAAVIQAELRDARLRLLADDIVTLREG
LAKEEADEAAVRERRAAAEQALAQAQEREAQLERAATEAAPLLARAQETYHALSRLKERL
SAVAGLAAERHRNLSSTGEEERRGRDPEELEREAEEIRAQEEELQDRLDAARTELEGVVF
DRAEAEAALRDEEQRVAAAARAAADRREGLARLRGRVEALRSRLEAGQAEIERLDQAAVE
ARERAAEAQTAFEEARAEAEGLELGDSELEEAHDQAREELAAAEARLNELRAAERAAERE
RAALDARREALAMGLERGDGAAALLTADADTPGLLGSLAAFLDVEPGAETAVAAALGAAS
DAVVLATREDAGAALELLKRHDAGRAGIVVAAAGTAVPQERRPGPPHGARPALDAVTPPD
RLREALTVLLADTVLVPDTATAGRVVAERPDLRAVTPDGDVFTAAFVHGGSTAVPSLLEV
RAAVDEATEQLAAAEETCKRAAADLADATIARERAAAAVEAVNARRRGTDRRRNEVAQQV
GKLGGQARAAVLEAERYTAASQKAARGREADLLALTELQERLEQAENEPVDDDEPDTARR
DRLAAEATRLRSVEMEARLAVRTAEERVRAITGRAEALLRTAAAERRAREEAARRRRRRA
AQAKVAEAVADGAAQALSRITVSLAAADGERRLAEEQRDTREAELRTVRTRVRELSVELE
KLLTVVHSGEVARAERRLRLEQLETRALEEWGMEAETLVAEYGPRVPVPPPADAEEADAV
PVPYVREVQEKRARTAERQLGRLGRINPLALEEFAALEERHNFLNTQLEDLKKTRRDLLT
VVKEVDDRVQEVFSAAYADVEHEFRRIFSRLFPGGEGRLVLTDPDDMLTTGVEVEARPPG
KKVKRLSLLSGGERSLTAVAFLVAIFRARPSPFYVMDEVEAALDDTNLQRLLVIFEELRA
ASQLIVITHQKRTMEVADALYGVTMRGDGISQVISQKLDRAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtatctgaagacactcacgctgcgcggattcaagtccttcgcctcggccaccaccctc
cgtttcgaaccaggcatcacctgcgtcgtgggccccaacggctccggcaagtccaacgtc
gtcgacgccctggcctgggtcatgggcgaacagggcgcgaagacactgcgcggcggcaag
atggaggacgtcatcttcgcggggacgtcctcccgcgccccgctcggccgcgccgaggtc
agtctcaccatcgacaacaccgacggcgcgctgcccatcgactactccgaggtcaccatc
aggcggaccatgttccgcaacggaggctccgagtacgccatcaacggcgacacctgccgc
ctgctcgacatccaggaactcctcagcgactccggcatcggccgcgagatgcacgtcatc
gtcggtcagggacaactcgacaccgtcctgcacgcgggcccggaggaacgccgcgcgctc
atcgaggaggccgccggaatcctcaagcaccgcaagcgcaaggagaaggcgctgcgcaag
ctctccgcgatgcagagcaacctcgaccgggtcagcgacctgaccgcggaactgcgccgc
cagctcaaacccctgggccgccaggccgaactcgcccggagggccgcggtcatccaggcc
gaactgcgcgacgcccggctccgcctgctcgccgacgacatcgtcaccctgcgcgagggc
ctcgccaaggaggaggccgacgaggcggcggtgcgggaacgccgcgccgccgccgaacag
gccctggcccaggcccaggaacgcgaggcgcaactcgaacgggccgccaccgaggccgct
ccgctgctggcccgggcgcaggagacctaccacgccctgtcccggctcaaggaacggctc
agcgcggtcgcgggcctggccgccgagcgccaccgcaacctctcctcgacgggcgaggag
gagcggcgcggccgggacccggaggaactggaacgcgaggccgaggagatccgcgcccag
gaggaggagctgcaggaccgcctggacgccgcccgcaccgaactggaaggcgtcgtcttc
gaccgggccgaggccgaggcggccctgcgcgacgaggagcagcgcgtcgccgccgccgca
cgggccgccgccgaccgccgtgaggggctggcccgcctccgcggccgggtggaggcgctg
cgcagcagactggaggccgggcaggccgagatcgaacggctcgaccaggccgcggtcgag
gcccgcgagcgcgcggccgaggcgcagaccgcgttcgaggaggcccgcgccgaggccgaa
gggttggaactgggcgacagtgaactggaggaggcccacgaccaggcccgcgaggaactg
gccgcggccgaggcccgcctcaacgagctgcgcgccgccgaacgcgccgccgaacgcgag
cgcgccgccctcgacgcccgccgggaggcgctcgcgatgggcctggagcgcggggacggc
gccgccgcgctcctgaccgccgacgccgacacccccgggctgctcggttcgctcgccgcc
ttcctcgacgtcgaaccgggcgccgagacagcggtcgccgcggccctgggcgcggcctcc
gacgccgtcgtgctggccacccgcgaggacgcgggcgcagccctcgaactgctcaaacga
cacgacgcgggaagagccgggatcgtcgtggccgccgcgggcacggccgtcccgcaggag
cgcagacccggcccgccgcacggtgcccggcccgccctggacgccgtcaccccgccggac
cggctacgcgaggcgctgaccgtcctgctcgccgacaccgtgctggtccccgacacggcc
acggcgggccgggtggtcgccgaacggcccgacctgcgcgcggtcacccccgacggggac
gtgttcaccgccgcgttcgtccacggcggctccaccgccgtccccagcctcctggaggta
cgggcggccgtggacgaggcgaccgaacagctcgcggcggccgaggagacctgcaaacgg
gccgccgccgacctcgccgacgccacgatcgcgcgggagcgggccgcggcggcggtcgag
gcggtcaacgcccggcgccgcggcacggaccggcgccgcaacgaggtcgcccagcaggtc
ggaaagctcggcggccaggcccgcgcggccgtcctcgaagccgaacggtacaccgccgcg
tcgcagaaggccgcgcggggacgcgaagccgacctgctggcgctcaccgaactccaggag
cgactggagcaggccgagaacgaacccgtcgacgacgacgaacccgacacggcgcggcgc
gaccggctcgcggcggaggccacccggctccggtcggtggagatggaggcgcgcctggcg
gtgcgcaccgcggaggagcgggtccgcgccatcaccggacgcgccgaggcgctgctgcgc
accgccgcggccgaacgtcgggcccgggaggaggcggcacggcgcaggaggcgccgcgcc
gcccaggcgaaggtggccgaggcggtcgccgacggtgcggcccaggcgctgagccgcatc
acggtgtccctggccgcggccgacggtgaacgccgcctcgccgaggagcagcgcgacacc
cgcgaagccgaactcagaaccgtccggaccagggtccgggaactctcggtggagctggag
aagctgctcaccgtggtgcacagcggcgaggtggcccgcgccgagcgccgcctgcggctg
gagcaactggagacgcgcgccctggaggagtggggcatggaggcggagacgctcgtggcc
gagtacggtccgcgcgtgccggtcccgccgcccgccgacgccgaggaggccgacgccgtc
ccggtcccgtacgtgcgcgaggtgcaggagaaacgcgccagaacggcggaacgccagctc
ggccggctcggcaggatcaacccgctggcgctggaggagttcgccgcactggaggagcgg
cacaacttcctcaacacccagctggaggacctcaagaagacccgccgcgacctgctgacc
gtggtcaaggaggtcgacgaccgggtgcaggaggtgttctccgccgcctacgccgacgtc
gaacacgagttccgccggatcttctcccggctcttccccggcggggagggccgcctcgtc
ctcaccgaccccgacgacatgctcaccaccggggtcgaggtcgaggcccgcccgcccggc
aagaaggtcaaacgcctgtccctgctctccggcggtgagcgctcgctgacggcggtggcc
ttcctcgtcgccatcttcagggcccggccctccccgttctacgtgatggacgaggtggag
gccgcgctggacgacaccaacctgcagcggctgctggtgatcttcgaggagttgcgcgcc
gcctcgcagttgattgtcatcacccaccagaagcgcaccatggaggtcgccgacgcgctc
tacggcgtgacaatgcggggggacgggatctcccaggtgatcagtcagaaactcgaccgg
gcgggctga
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