Thermobifida halotolerans: NI17_001225
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Entry
NI17_001225 CDS
T08032
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
thao
Thermobifida halotolerans
Pathway
thao03030
DNA replication
thao03430
Mismatch repair
thao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI17_001225 (holA)
03430 Mismatch repair
NI17_001225 (holA)
03440 Homologous recombination
NI17_001225 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thao03032
]
NI17_001225 (holA)
03400 DNA repair and recombination proteins [BR:
thao03400
]
NI17_001225 (holA)
Enzymes [BR:
thao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI17_001225 (holA)
DNA replication proteins [BR:
thao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI17_001225 (holA)
DNA repair and recombination proteins [BR:
thao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI17_001225 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UOE19917
UniProt:
A0A399G2Y3
LinkDB
All DBs
Position
complement(287442..288410)
Genome browser
AA seq
322 aa
AA seq
DB search
MDSTSVPPLSVVVGDEELLVDRAVAELVAAVRADDPDVDVHDLVPSQVSAGKLVEVTSPS
LFGERRVVVLRSAQDLTKEPAGVVTDYLKDPADDVVLVLAHAGGAKGKALLQTALKAGAH
RIDCAKPTKDAERVKFIRGEFSRAGRQIAPDAAQALLDAVGTDLREIAAACTQLIADTEG
RVDAAAVARYHRGRAEASGFTVADRTVEGRLPEALEQLRWALAVGMAPVLINSALAGAVR
GIAVAVQPTRGVSDAELAKRARVPPWKLRTIRQQARGWSPRGVAHAMRVVAETDALIKGA
GRDPAYALERAVIEIATARGRR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggactccacctccgttccgccgctgtccgtcgtcgtcggcgacgaggaactgctcgtc
gaccgcgccgtcgccgaactcgtggccgcggtgcgtgccgacgaccccgacgtggacgtg
cacgacctggtgccctcccaggtcagtgccgggaaactggtcgaggtcacctcgccgtcg
ctgttcggggagcgccgggtggtggtgctgcgctcggcgcaggacctcaccaaggagccc
gccggggtggtcaccgactacctgaaggacccagccgacgacgtggttctggtgctggcg
cacgcgggcggcgccaagggcaaggcgctgctgcagaccgcgctgaaggcgggggcgcac
cggatcgactgcgccaaaccgaccaaggacgccgaacgggtgaagttcatccggggcgag
ttctcccgcgccgggcggcagatcgccccggacgccgcgcaggcgctgctggacgcggtc
ggcaccgacctgcgggagatcgcggcggcctgcacccagttgatcgccgacaccgagggc
agagtggacgccgcggccgtggcccgctaccacaggggcagggcggaggcgtccgggttc
accgtcgccgaccgcacggtggagggccgtctgcccgaggcgctggagcagttgcgctgg
gcactggcggtgggcatggccccggtactgatcaacagcgcgctggcgggcgcggtgcgc
ggaatcgcggtcgccgtgcagcccacgcgcggggtctccgacgccgaactcgccaagcgc
gccagggtgccgccgtggaagctgcgcaccatccgccagcaggcccgcgggtggagtccg
cggggggtggcgcacgcgatgcgcgtggtcgccgagaccgacgccctgatcaagggcgcg
ggccgcgaccccgcctacgccctggagcgcgccgtcatcgagatcgccacggcgcggggg
aggcggtga
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