Thermobifida halotolerans: NI17_001850
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Entry
NI17_001850 CDS
T08032
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thao
Thermobifida halotolerans
Pathway
thao03030
DNA replication
thao03430
Mismatch repair
thao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NI17_001850
03430 Mismatch repair
NI17_001850
03440 Homologous recombination
NI17_001850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thao03032
]
NI17_001850
03400 DNA repair and recombination proteins [BR:
thao03400
]
NI17_001850
Enzymes [BR:
thao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NI17_001850
DNA replication proteins [BR:
thao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NI17_001850
DNA repair and recombination proteins [BR:
thao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NI17_001850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UOE20022
UniProt:
A0AA97LXH2
LinkDB
All DBs
Position
420500..421471
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AA seq
323 aa
AA seq
DB search
MRDTWTAVDFETANRDRGSVCAVGLVRVEDGRIVDRYTTLVRPPEPVDHFAPFNIDFHGI
TPEQVADAPEWPRVHRTILEFADGGPFVAHNAVFDMGVIQAACAHTGLAEQPLDYVCSLH
TARRTWPALRDHRLPTVCRQIGHELRRHHAADADAEAAAHIMLAAFRAHGVATLPELCLR
LRRPPRRATAPTEPQPPRTAPLWSADSRFDRWRREADEPLPEPDPGADPDGPLFGRVVCV
SGDLVGMSKTEVWRRVAAVGGVPAKNVTRRTDVLVTGANGGAKTAKHRRAESYNASGSRI
DIIDEAELLARLAAGGQRLRGRP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacacctggaccgccgtcgacttcgagaccgccaaccgcgaccggggcagcgtc
tgcgcggtcggactggtgcgggtcgaggacggccggatcgtcgaccgctacaccactctg
gtccggccccccgaaccggtcgaccacttcgcccccttcaacatcgacttccacgggatc
acccccgagcaggtcgccgacgccccggagtggccgagggtgcaccgcaccatcctggag
ttcgccgacggaggccccttcgtcgcccacaacgccgtcttcgacatgggcgtcatccag
gccgcctgcgcccacaccggcctggccgagcagcctctcgactacgtgtgctccctgcac
accgcgcggcggacctggcccgcgctgcgcgaccaccgactgcccacggtgtgccgccag
atcgggcacgaactgaggcggcaccacgccgccgacgccgacgccgaggccgccgcgcac
atcatgctcgccgcgttccgggcgcacggggtggccacgctgcccgagctgtgcctgcgg
ctgcgccgcccgccgcgacgcgccacggcgccgaccgagccgcagccgccccgaaccgct
ccgctgtggtccgccgactccaggttcgaccggtggcggcgggaggccgacgagccgctg
cccgaaccggaccccggcgccgaccccgacggcccgctgttcggccgggtcgtctgcgtc
agcggagacctggtcggcatgtccaagaccgaggtgtggcggcgcgtcgccgcggtgggc
ggagtcccggccaagaacgtcacccgcaggaccgacgtcctcgtcacgggagccaacggg
ggagccaagaccgccaaacaccgccgggccgagtcctacaacgccagcggatcgcgcatc
gacatcatcgacgaggccgaactgctggcccggctggccgccgggggccagcggctgcgc
ggacggccctga
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