Thermobifida halotolerans: NI17_003495
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Entry
NI17_003495 CDS
T08032
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thao03009
]
NI17_003495
Enzymes [BR:
thao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NI17_003495
Ribosome biogenesis [BR:
thao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NI17_003495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UOE20318
UniProt:
A0AA97M4L0
LinkDB
All DBs
Position
778684..780210
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AA seq
508 aa
AA seq
DB search
MNKPHDDDGRRRRGGDNGPRGERGRSTPRGARGDSDHSGRRGGRDQRAERSDRDFRGGRR
GSRDREEYADRGERRGGQYRREERDGRFRDRDERPRAERSDRDFRGGRRGSRDREEYADR
GERRGGQYRREERDGRFRDRDERPRAERSDRESRGGRRGSRDREEYADRGERRGGQYRRE
ERDGRFRDRDERPRAERSDRESRSGRRDTPGSRDRRTEHPRPATRTGRDSERELSARARA
RLRTLRAEYDPGDDDPADDERDTYADVPGGIRLQKALAQAGVASRRASEELIATGRVTVD
GQVVRRFGARVDPEKSEIRVDGMRVVTSTDLRYYALNKPRGVVSTMDDPQGRPTLADYAG
QSDERLFHVGRLDTETEGLILLTNDGELANRLTHPRYKVVKTYIAKVPGPVPREVVRRVR
GGVELDDGFVEVDSFRVVDNVEPKALVEIRLHEGRKHIVRRLMEAVGHPVSDLARTQIGP
VGLNNLKVGTVRALTSKEISELYTAAGM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaccacacgatgatgacggtcgccgccgccgtggcggcgacaacggaccgcgc
ggtgagcgcggccggtccaccccgcgcggtgcgcgcggcgattccgaccactccggccgt
cgcggcggccgggaccagcgtgccgaacggtccgaccgggacttccggggtgggcggcgc
ggttcccgtgaccgtgaggagtatgccgaccgcggtgagcggcgcggcgggcagtaccgc
cgggaggagcgggacgggcggttccgcgaccgtgacgagcggccgcgtgccgaacggtcc
gaccgggacttccggggtgggcggcgcggttcccgtgaccgtgaggagtatgccgaccgc
ggtgagcggcgcggcgggcagtaccgccgggaggagcgggacgggcggttccgcgaccgt
gacgagcggccgcgtgccgaacggtccgaccgggagtcccggggtgggcggcgcggttcc
cgtgaccgtgaggagtatgccgaccgcggtgagcggcgcggcgggcagtaccgccgggag
gagcgggacgggcggttccgcgaccgtgacgagcggccgcgtgccgaacggtccgaccgg
gagtcccggagtgggcggcgcgacacccccggctcccgcgaccgccgcaccgaacacccc
cggcccgccacccgcaccggacgcgactccgaacgcgagctgtcggcccgggccagagcc
cgtctgcggaccctgcgcgccgagtacgaccccggtgacgacgacccagccgacgacgaa
cgcgacacctacgccgacgttcccggcggtatccggctgcagaaggccctcgcccaggcg
ggagtggccagccgccgcgccagcgaggagctgatcgccaccggacgggtcaccgtcgac
ggccaggtggtccggcggttcggcgcccgcgtcgacccggagaagtccgagatccgcgtc
gacggcatgcgcgtggtcacctcgaccgacctgcgctactacgcgctgaacaagccgcgc
ggcgtcgtcagcaccatggacgacccgcaggggcggcccaccctcgccgactacgccggg
cagagcgacgagcgactgttccacgtcggccgcctcgacaccgagaccgagggcctcatc
ctgctcaccaacgacggcgagctggccaaccggctcacccacccccgctacaaggtcgtc
aagacctacatcgcgaaggtgccggggccggtgccgcgcgaggtcgtcaggcgggtccgc
gggggcgtggagctcgacgacggattcgtcgaggtcgactccttccgcgtggtggacaac
gtcgaacccaaggcgctggtcgagatccggctgcacgagggacgcaagcacatcgtgcgg
cgtctcatggaggccgtcggccaccccgtgtcggacctcgcgcgcacccagatcggaccg
gtcggactcaacaacctcaaggtcggtacggtgagggcgctgacctcgaaggagatcagc
gagctctacactgccgcagggatgtag
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