Thermobifida halotolerans: NI17_007450
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Entry
NI17_007450 CDS
T08032
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thao03016
]
NI17_007450
Enzymes [BR:
thao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NI17_007450
Transfer RNA biogenesis [BR:
thao03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NI17_007450
Prokaryotic type
NI17_007450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UOE20991
UniProt:
A0A399G5R5
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All DBs
Position
1679525..1680451
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AA seq
308 aa
AA seq
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MSTRELTILGTASAVPTKRRGHNGYFLRWDAHGILFDPGEGTQRQMRHAGLAAHDITRIC
VTHFHGDHSLGLPGVVQRIARDRVDHPVRVAYPGQAQAYWERLRHATSFVDTDVVEAQPV
AGQEAVVAGEEDLVVTALPLHHSIPTYGYRIAEPDSVRMLADRLAERGIRGPAVGRLKAE
GFVVDAAGRRVELADHSVPRRGQVFAFVMDTGLCDNAIRLAEGADLLVIEATFLDADADL
AERYRHLTAAQAGYVAARAGVRRVVLTHISERYGSDDDARFVAEAAEHFDGDIVLAEDLA
RVAVPRRV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcgcgaactcaccatcctgggcaccgccagcgcggttccgaccaagcggcgc
ggacacaacggctacttcctgcgctgggacgcccacggcatcctgttcgaccccggtgag
ggcacccagcggcagatgcggcacgcgggcctggccgcgcacgacatcacccgcatctgc
gtcacccacttccacggcgaccacagcctgggtctgcccggggtggtgcagcgcatcgcc
cgcgaccgcgtcgaccacccggtgcgggtggcctaccccgggcaggcccaggcctactgg
gagcggctgcggcacgccacctccttcgtcgacaccgacgtcgtggaggcccagcccgtg
gccgggcaggaggcggtcgtggcgggggaggaggacctggtggtcaccgcgctgccgctg
caccactcgatccccacctacggctaccggatcgccgaacccgacagtgtgcggatgctg
gccgaccggctcgccgagcgcgggatccgcggtccggcggtgggccggctcaaggccgag
gggttcgtggtggacgcggcggggcggcgcgtggagttggccgaccacagcgtccccagg
cgagggcaggtgttcgcgttcgtgatggacaccggcctgtgcgacaacgcgatccggttg
gccgagggcgccgacctgctggtgatcgaggcgacctttctcgacgccgatgccgacctg
gccgaacgctaccggcacctgaccgccgcgcaggccggatacgtcgccgcgcgcgccggg
gtgcgccgcgtggtgctgacccacatctccgaacgctacggcagcgacgacgacgcgcgg
ttcgtggcggaggccgccgagcacttcgacggcgacatcgtgctggccgaggacctggcg
cgggtcgcggtgccgcgccgcgtctga
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