Thermobifida halotolerans: NI17_010815
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Entry
NI17_010815 CDS
T08032
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thao
Thermobifida halotolerans
Pathway
thao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NI17_010815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thao03400
]
NI17_010815
Enzymes [BR:
thao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NI17_010815
DNA repair and recombination proteins [BR:
thao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NI17_010815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
AAA_22
PhoH
AAA_16
nSTAND3
NPHP3_N
DAP3
DEAD
UvrD_C
PIF1
UvrD-helicase
HHH_2
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
UOE21541
UniProt:
A0A399G5Z1
LinkDB
All DBs
Position
complement(2428147..2430357)
Genome browser
AA seq
736 aa
AA seq
DB search
MASGEPFRTAVLEGVLERITYANEETGYTVARVDTGRGGDLVTAVGSLLGAHPGESLRME
GRWTSHPQYGRQFQVDNYTTVLPATVQGIRRYLGSGLVKGVGPRLAEHIVNHFGDQALDV
IEHTPERLMEVPKLGPKRTKIITEAWEEQKAIKEVMVFLQGIEVSTSLAVRIYKKYGDDS
IRVVREEPYSLAADVWGIGFKTADSIARAVGIPHDSPQRVKAGIQFTLSESTGNGHCFLP
EETLISEAVKILQVDSALVIDCLAELVAEEGVVREKLPDRDGETVTGVYLVPFHRAETSL
ANQLRALLDAPEDRLGAFADVDWDRALSWLRERTGAELAPAQERAVRLALTRKVAVLTGG
PGCGKSFTVASVITLAAAKRARIVLAAPTGRAAKRLTELTGHEASTVHRLLELRPGGDAS
YDRDRPLDCDLLVVDEASMLDLLLANKLAKAVPPGAHLLFVGDVDQLPSVGAGQVLRDLL
ADGSPVPSVRLTQVFRQAAQSGVVTNAHRVNTGKPVELAGMSDFFLFPCEDAEAAAEMTV
DVVANRVPRRFGLDPRRDIQVLAPMHRGPAGAGNLNVLLQEALTPSRPGAPERRVGGRVF
RVGDKVVQIRNNYDKGANGVFNGTLGNVTAIDPVEQALTVLTDESEEVGYDFAELDELTH
AYALTVHRSQGSEYPCVVIPVTTSAWMMLQRNLLYTAITRAKRLVVLVGSRRAVAQAVRN
TASGRRHTALDHRLAG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtgaaccgttccgcacggcggtgctcgaaggggtgctggagcgcatcacc
tacgccaacgaggagaccggctacaccgtggcccgcgtggacaccgggcgcggcggcgac
ctggtcaccgcggtcggctcgctgctgggcgcccatcccggcgagtcgctgcgcatggag
gggcgctggacctcccacccccagtacgggcggcagttccaggtggacaactacacgacg
gtgctgcccgcgaccgtgcagggcatccgccgctacctgggctcggggctggtcaagggg
gtggggccgcggctggccgagcacatcgtcaaccacttcggcgaccaggcgctcgacgtc
atcgagcacacccccgaacggctcatggaggtgcccaagctcggccccaagcgcacgaag
atcatcaccgaggcgtgggaggagcagaaagccatcaaggaggtgatggtcttcctccag
ggcatcgaggtctccacgtcactggcggtgcgcatctacaagaagtacggcgacgactcg
atccgggtggtgcgcgaggagccctactcgctggccgccgacgtgtggggcatcgggttc
aagaccgccgactccatcgcccgcgcggtcggcatcccgcacgacagcccgcagcgcgtc
aaggccggaatccagttcaccctgtcggagtccacgggcaacggccactgctttctgccc
gaggagacgctgatcagcgaggctgtcaagatcctgcaggtcgactcggccctggtgatc
gactgcctggccgaactcgtcgccgaggagggggtggtgcgcgagaagctgcccgaccgc
gacggcgagacggtgacgggcgtctacctggttccgttccaccgcgccgagacgtcgctg
gccaaccagttgcgcgccctgctggacgcccccgaggaccgcctgggcgccttcgccgac
gtggactgggaccgggcgctgtcctggctgcgcgagcgcaccggcgccgagctggctccc
gcccaggagcgggcggtccggctcgcactgacccgcaaggtcgcggttctcaccggcggc
ccgggctgcggcaagtccttcaccgtcgcctccgtcatcaccctggccgcggccaaacgc
gccaggatcgtcctggccgcccccaccgggcgcgcggccaagcggttgaccgagctgacc
gggcacgaggcctccaccgtgcaccggctgctggagctcagacccggcggcgacgcctcc
tacgaccgggaccgccccctcgactgcgacctgctcgtggtcgacgaggcgtccatgctc
gacctgctgctggccaacaagctggccaaggccgtccctcccggcgcgcacctcctgttc
gtcggcgacgtcgaccagcttccctcggtgggcgccggacaggtgctgcgcgacctgctg
gccgacggctctcccgtgcccagcgtccgcctcacccaggtgttccgccaggccgcccag
tccggtgtggtcaccaacgcgcaccgcgtcaacaccggcaagcccgtcgaactggcgggg
atgtcggacttcttcctctttccctgcgaggacgccgaggccgccgcggagatgaccgtc
gacgtggtcgccaaccgcgttccccgccgcttcggtctcgacccgcgccgcgacatccag
gtcctggcccccatgcaccgcggtcccgccggagcgggcaacctcaacgtgctgctgcag
gaggcgctcaccccgtcccgtccgggagcgcccgagcggcgcgtgggcggccgggtgttc
cgggtcggcgacaaggtggtgcagattcgcaacaactacgacaagggagccaacggggtg
ttcaacggcaccctgggcaacgtcaccgccatcgacccggtcgagcaggcgctgacggtc
ctcaccgacgaaagcgaggaggtcggctacgacttcgccgaactcgacgagctgacccac
gcctacgcgctgaccgtgcaccgctcccagggcagcgagtacccgtgcgtcgtcatcccc
gtgaccaccagcgcctggatgatgctgcagcgcaacctgctctacaccgccatcacccgc
gccaaacggctggtggtcctggtcgggtcgcgccgggccgtcgcccaggcggtgcgcaac
accgcctcggggcgtcgccacaccgcactggaccaccggctggccgggtga
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