Thermobifida halotolerans: NI17_010910
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Entry
NI17_010910 CDS
T08032
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thao03019
]
NI17_010910
Enzymes [BR:
thao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NI17_010910
Messenger RNA biogenesis [BR:
thao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NI17_010910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UOE21556
UniProt:
A0A399G6S6
LinkDB
All DBs
Position
complement(2451584..2454427)
Genome browser
AA seq
947 aa
AA seq
DB search
MSTYAARYAEFRRRQQESSRAIEDFQALYGFEFDDFQVRACKALETGHGVLVAAPTGSGK
TVVGEFAVHLALRDGRKCFYTTPIKALSNQKYTDLVRRYGAEKVGLLTGDNSINGEAPVV
VMTTEVLRNMLYAGSATLSGLAYVVMDEVHYLADRFRGAVWEEVIIHLPESVQMVALSAT
VSNAEEFGQWLQQVRGDTSVIVDEKRPVPLWQHVMVGTRIHDLFVEPDNGAAEPEADDKG
RGSRKRRRNRSGAQRAVEIEVNGERLLVNPRLVRLAEEDARVTQLAYQRRHPQARARGGA
PRPRSKFAPPSRVQIVEELDREGLLPAITFIFSRAGCDDAVRQCVASGLVLTTPTEAAQI
REYAERQCADIPPPDLAVLGYSEWLQALECGIAAHHAGLLPTFKEVVETLFSQGLIRAVF
ATETLALGINMPARTVVIEKLDKWNGETHAPLTPGEYTQLTGRAGRRGIDVEGHAVVVWQ
PGTDPEAVAGLAGTRTYPLNSSFQPSYNMAVNLVAQVGRERGRAMLESSFAQFQADRAVV
GLVRKLRKQQEALEGYAKAAEDPRGDFMEYAAMRRRLSDLESDAQRNRRTARRREAERSL
RSLKPGDIIRIPSGRQSGYAVVLDPGLDKGPLPAPLVLTVNRQVKRVNASDFPIPVEPSG
RMRLPKSFSARSAQSRRDLASALRSKLDTLPAAPVRHRVRDGSAEDPEIAELRARIREHP
CHHSEGREDRARWAERYFRLKKETDELERRIAGRSHVIARTFDRVCGVLEELDYLEDDTV
TEEGRLLGRIYSELDLLAAEALRRGVWEQLGPEELASCVSALVYESRRSDDAFPRVPAGP
VEEALTDMVRLWGELHDIEHRHRVSFLREPELGFVWATHRWARGDRLDLILNEAGMPAGD
FVRTTKQLIDLLGQIAQAAPADGGVRTTARQAADALLRGVVAYSSVG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttatgccgctcgctacgccgagttccgcaggcgacagcaggagtccagccgc
gccatcgaggacttccaggccctgtacggattcgagttcgacgacttccaggtccgggcc
tgcaaggcgttggagacgggccacggggtgctggtggccgcgcccaccgggtcgggaaag
accgtcgtgggcgagttcgccgtccacctggcgctgcgcgacggccgcaagtgcttctac
accacccccatcaaggcgctgtccaaccagaagtacaccgacctggtgcgccgctacggc
gccgagaaggtcggtctgctcaccggcgacaacagcatcaacggcgaggcgcccgtggtg
gtgatgaccaccgaggtgctgcgcaacatgctgtacgcgggctcggccacgctgtcggga
ctggcctacgtggtcatggacgaggtgcactatctcgccgaccggttccgcggcgcggtg
tgggaggaggtcatcatccacctgcccgagtcggtgcagatggtggcgctgagcgcgacg
gtcagcaacgccgaggagttcgggcagtggctgcaacaggtgcgcggcgacacctcggtg
atcgtcgacgagaagcgcccggtgccgctgtggcagcacgtgatggtgggcacccgcatc
cacgacctgttcgtggagcccgacaacggggccgccgagccggaggccgacgacaagggg
cgcgggtcccgcaaacgccgccgcaaccgctccggcgcgcagcgcgcggtcgagatcgag
gtcaacggggaacggctgctggtcaacccgcggctcgtccggctggccgaggaggacgcc
cgcgtcacccagttggcctaccagcgccgccacccccaggcgcgggcgcgcggcggtgct
ccccgtccccgcagcaagttcgcgccgcccagccgcgtgcagatcgtggaggaactcgac
cgcgagggcctgctgcccgccatcaccttcatcttcagccgggcgggctgcgacgacgcg
gtgcgccagtgcgtggcgagcgggctggtgctgaccaccccgaccgaggccgcccagatc
cgcgagtacgccgaacgccagtgcgccgacatccccccgcccgacctggcggtgctcggc
tactccgagtggctgcaggcgctggagtgcggcatcgccgcccaccacgccgggctgctg
cccaccttcaaggaggtggtggagacgctgttctcccaggggctgatccgcgcggtcttc
gccaccgagacgctggcgctgggcatcaacatgcccgcccggaccgtggtgatcgagaaa
ctggacaagtggaacggcgagacccacgccccgctcaccccgggcgagtacacccagctc
accggccgcgccgggcgccgcggcatcgacgtggaggggcacgcggtcgtggtgtggcag
ccgggcaccgaccccgaggcggtcgcgggcctggccggaacccgcacctatccgctcaac
tccagcttccagccgtcctacaacatggcggtcaacctggtcgcgcaggtcggccgggaa
cgcggccgggccatgctggagtcctccttcgcccagttccaggccgaccgcgccgtggtg
ggcctggtgcgcaagctgcgcaagcagcaggaggcgctggagggctacgccaaggccgcc
gaggacccgcgcggcgacttcatggagtacgcggcgatgcgccgccgcctcagcgacctg
gagagcgacgcccagcgcaaccggcgcacggcgcgccgcagggaggccgagcgcagcctg
cggtccctcaaacccggcgacatcatccgcatcccctcgggacgccagtccggctacgcc
gtcgtgctggacccgggcctggacaagggcccgctgcccgcgccgctggtgctgaccgtc
aaccgtcaggtcaaacgggtcaacgccagcgacttcccgatcccggtggagccgtcgggg
cggatgcggctgcccaagtcgttctcggcgcgctcggcccagtcccgccgcgacctggcg
tcggcgctgcgcagcaagctcgacacgctgccggccgccccggtgcggcaccgcgtccgc
gacgggtcggccgaggatcccgagatcgccgagctgcgcgcacggatccgggagcacccc
tgccaccacagcgagggccgcgaggaccgggcgcgctgggcggagcgctacttccggctc
aagaaggagaccgacgagctggagcgccgcatcgcgggccgctcccacgtcatcgcccgc
accttcgaccgggtctgcggggtgctggaggaactggactacctcgaagacgacaccgtc
accgaggaggggcggctgctcggccgcatctactccgaactggacctgctggccgccgag
gcgctgcggcgcggggtgtgggagcagttgggccccgaggagctggcctcgtgcgtgtcg
gcgctggtgtacgagtcgcggcggtccgacgacgccttcccccgggtcccggcggggccc
gtggaggaggcgctgaccgacatggtgcggctgtggggggagttgcacgacatcgagcac
cggcaccgcgtgtcgttcctgcgcgaaccggagttggggttcgtgtgggccacccatcgg
tgggcgcgcggcgaccggctggacctcatcctcaacgaggcgggcatgcccgccggcgac
ttcgtgcgcaccaccaagcagctcatcgacctgctcggccagatcgcccaggccgccccc
gccgacggcggggtgcgcaccacggcccggcaggccgccgacgcgctgctgcgcggcgtg
gtcgcctactcctcggtgggctga
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