Thermobifida halotolerans: NI17_012360
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Entry
NI17_012360 CDS
T08032
Name
(GenBank) cellulose binding domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NI17_012360
Enzymes [BR:
thao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NI17_012360
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
CBM_2
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
UOE17705
UniProt:
A0A399G7I1
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All DBs
Position
complement(2781971..2784238)
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AA seq
755 aa
AA seq
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MRHVPPDSAPRGPARALAVLTALALCSTAAVATGAPAAAAAGCDVDYSVNQWNTGFTGNL
TVTNLGDPVDGWTLRWSFPSGERITQGWNAEFASSGADVTASNVSWNAAIGTGGTVSFGF
NATHTGEVGVPESFTLNGVVCTGRTDPDDPEEPEEPEEPEEPEEPEPPADPTGARQAERL
DRGLISVRSGDGNLVSWRLLGSDPQDVAFNVYRGSTRLNSAPLTDATSYLDSGAPADASY
TVRPVVDGVERAASPASLNFTDGYLDVPLQRPAGGSVNGSSYTYDANDASVGDLDGDGRY
EIVLKWEPTNAKDNSQSGHTGPVLIDAYELDGTRLWRIDLGRNIRAGAHYTQFQVYDYDG
DGRAEVAMKTADGTRDGTGAVIGSASADHRNSSGYVLSGPEYLTVFDGRTGRALDTADYV
PARGNVSSWGDSYGNRVDRFLAGTAYLDGQRPSMIFSRGYYTRTVIAAWDFRDGRLTRRW
TFDTDSSTNAGRGYDGQGFHSLSVADADGDGRDEIMFGAMAVDDDGRAMWTTGYGHGDAL
HVGDFVPHRSGLEVYGVSESSSQPNAWLVDARTGATLWRTASGDDNGRGVAGDVWAGSPG
AEFWSSSVSGLLNTSGTSVGRKPGSANFLIWWDGDPTRELLDQTRIDKYGPNGDSRLLTG
SGVASNNGTKATPALSGDILGDWREEVVWRTGDNSALRIHATPHPTDLRVPTLMHDTQYR
VAVAWQNTAYNQPPHPSFPIGDGMAAPPWPDIHHP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgcggcacgttccccccgacagcgctccgcgaggaccggcacgcgccctcgccgtgctc
accgcgctcgccctgtgctcgaccgcggccgtggcgaccggcgcccccgccgcggccgcc
gccggatgcgacgtcgactacagcgtcaaccagtggaacaccggcttcaccggcaacctc
accgtcaccaacctcggcgatcccgtcgacggctggaccctgcggtggagcttcccctcc
ggggagcgcatcacccagggctggaacgccgagttcgcctcctccggagccgacgtcacc
gcctccaacgtctcctggaacgccgcgatcggcaccggcggcacggtcagcttcggcttc
aacgccacccacaccggagaggtcggcgtccccgagtccttcaccctcaacggcgtcgtc
tgcaccggccggaccgacccggacgaccccgaggaaccggaagagcccgaggagcctgaa
gaaccggaggagccggagcccccggccgaccccaccggagcccgccaggccgaacggctc
gaccgcggcctgatcagcgtgcgcagcggcgacggcaacctggtgagctggcggctgctc
ggctcggacccgcaggacgtcgcgttcaacgtctaccgcggctccacccgcctcaactcc
gccccgctcaccgacgccacctcctacctggactccggcgccccggcggacgcctcctac
acggtgcgcccggtcgtcgacggagtcgagcgggccgcctcgcccgcctccctgaacttc
accgacggctacctcgacgtacccctgcagcgccccgcgggcggcagtgtcaacggctcc
tcctacacctacgacgccaacgacgccagcgtcggcgacctcgacggcgacggccgctac
gagatcgtcctcaagtgggagcccaccaacgccaaggacaactcccagtccggccacacc
ggcccggtgctcatcgacgcctacgaactcgacggcacccggctgtggcgcatcgacctg
ggccgcaacatccgcgccggagcccactacacccagttccaggtctacgactacgacggc
gacggccgcgccgaggtcgccatgaagaccgccgacggcacccgcgacggcacgggcgcg
gtcatcggctcggcctccgccgaccaccgcaactcctccggctacgtgctgtccggcccc
gagtacctgaccgtcttcgacggacgcaccggccgggccctggacaccgccgactacgtg
ccagcccgcggcaacgtgtcgtcgtggggcgactcctacggcaaccgggtggaccgcttc
ctcgccggaaccgcctacctggacggacagcggcccagcatgatcttctcccgcggctac
tacacccgcaccgtcatcgcggcgtgggacttccgcgacgggcggctgacccgccggtgg
accttcgacaccgacagctccaccaacgccggacgcggatacgacggccagggcttccac
tccctgtccgtcgccgacgccgacggcgacggccgcgacgagatcatgttcggcgcgatg
gccgtcgacgacgacgggcgcgccatgtggaccaccggctacggccacggcgacgccctg
cacgtcggcgacttcgtgccccaccgctccggcctggaggtctatggcgtctccgagagc
agctcccagcccaacgcgtggctggtcgacgcgcgcaccggcgccaccctgtggcgcacc
gcctccggtgacgacaacgggcgcggcgtggccggtgacgtctgggcgggcagccccggc
gcggagttctggtcgtcgagcgtgagcggcctgctcaacacctccggaaccagcgtcggc
cgcaagcccggctcggccaacttcctgatctggtgggacggcgaccccacccgggaactg
ctcgaccagacccgtatcgacaagtacggtccgaacggcgacagccgcctgctcaccgga
agcggcgtggcctccaacaacggcaccaaggccaccccggcgctgtccggcgacatcctc
ggcgactggcgcgaggaggtcgtctggcgcaccggcgacaactcggcgctgcgcatccac
gccacgccccacccgaccgacctgcgcgtgcccaccctgatgcacgacacccagtaccgg
gtggcggtcgcctggcagaacaccgcctacaaccagccgccgcacccgtccttccccatc
ggcgacggcatggcggcgccgccgtggcccgacatccaccacccctga
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