Thermobifida halotolerans: NI17_015835
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Entry
NI17_015835 CDS
T08032
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thao
Thermobifida halotolerans
Pathway
thao03420
Nucleotide excision repair
thao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI17_015835 (pcrA)
03430 Mismatch repair
NI17_015835 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thao03400
]
NI17_015835 (pcrA)
Enzymes [BR:
thao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI17_015835 (pcrA)
DNA repair and recombination proteins [BR:
thao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI17_015835 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NI17_015835 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOE18297
UniProt:
A0A399G0N1
LinkDB
All DBs
Position
complement(3570435..3572711)
Genome browser
AA seq
758 aa
AA seq
DB search
MSSQEQLLEGLNEPQRAAVLHEGGPLLIVAGAGSGKTRVLTHRVAYLLAERGVRPGEVLA
ITFTNKAAAEMRERIEGLLGERVAGAMWVMTFHSACVRILRREAGRLGYPSSFTIYDSAD
SRRLMQLVCRELDLDPKRFPPKSFSAQVSNLKNELVDYDTFADRAANEQERTLAEAYKLY
QQRLYEAGAMDFDDLIMVTVNLLQMFPEVAEYYRRRFRHLLVDEYQDTNHAQYELVRALV
GPAETDSALPGPELCVVGDADQSIYAFRGATIRNILEFERDYPQATTILLEQNYRSSQNI
LTAANAVIARNAERRPKDLWSARGEGPPIVGYVADNEHDEAAFVVGEIDTLTDEGACTPG
DVAVFYRTNAQSRVLEEVFVRTGLPYRIVGGVRFYERREIRDILAYLRVLANPEDTVSLR
RILNVPKRGIGDRAEAVVELFAARERITFARALRRADEAPGIATRSLKAIREFVALLEEL
EALVPTSSPAEMVEAVLERTGYLSELVNSKDIQDESRVENLEEFVGVAREFEASFGGVPG
EEADDADGTGTEEAAEPTLVDFLEQISLIADTDQVPDADEQGGAVTLMTLHSAKGLEFPV
VFLTGLEDGVFPHLRTLGDRSALEEERRLAYVGITRAQERLYLSRAAVRSSWGAPAYNPA
SRFLDEIPAELVTWRRAESSMGAFGRSASPVRGSVATRRPERRVPSLRPGDKVNHDSFGL
GTVLLVDGTGDRTKVRVDFGADIGEKDLMVRFAPIEKL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcccaagagcagcttctcgaaggtctcaacgagccccagcgcgccgccgtgctc
cacgagggcggcccgctgctgatcgtcgcgggagcggggtcgggcaagacccgggtcctc
acgcaccgcgtcgcctacctgctggccgagcggggggtgcgccccggcgaggtgctcgcg
atcaccttcaccaacaaggccgcggccgagatgagggagcggatcgagggactgctgggt
gagcgtgtggcaggcgccatgtgggtcatgaccttccactcggcgtgcgtgcgcatcctg
cgccgcgaggccggacgcctgggatacccgagcagcttcaccatctacgactccgccgac
tcccggcggctgatgcagcttgtctgccgcgaactcgacctggaccccaagcgcttcccg
cccaagtcgttctccgcgcaggtgtcgaacctcaagaacgaactggtggactacgacacc
ttcgccgaccgtgcggccaacgagcaggagcggacgctcgccgaggcgtacaagctctac
cagcagcgcctgtacgaggcgggcgcgatggacttcgacgacctgatcatggtcaccgtc
aacctgctccagatgttccccgaggtcgccgagtactaccggcggcggttccggcacctg
ctcgtggacgagtaccaggacaccaaccacgcccagtacgaactggtgcgcgcgctcgtg
ggccccgccgaaaccgactcggcgctcccgggaccggagctgtgcgtggtgggcgacgcc
gaccagtccatctacgccttccgcggggcgacgatccgcaacatcctggagttcgagcgc
gactacccgcaggccacgaccatcctgctggagcagaactaccggtccagccagaacatc
ctgaccgcggccaacgccgtcatcgcgcgcaacgcggagcggcgccccaaggacctgtgg
tcggccaggggcgaggggccgcccatcgtcggttacgtcgccgacaacgagcacgacgag
gcggcgttcgtcgtcggcgagatcgacaccctcaccgacgagggcgcctgcacgcccggt
gacgtcgcggtcttctaccggaccaacgcccagtcccgggtgctggaggaggtgttcgtc
cgtaccgggctgccgtaccggatcgtcggcggagtgcggttctacgagcggagggagatc
cgcgacatcctcgcctacctgcgggtgctcgccaacccggaggacacggtgagcctgcgc
cggatcctgaacgtgcccaagcggggcatcggcgaccgcgcggaggcggtggtcgagctg
ttcgccgcccgggagcggatcaccttcgccagggcgctgcgccgcgcggacgaggcgccg
gggatcgcgacccgttcgctcaaggcgatccgggagttcgtcgccctgctggaggagctg
gaggcgctggtccccacgagcagcccggccgagatggtcgaggcggtcctggaacgcacc
ggctacctgagcgaactcgtcaactccaaggacatccaggacgagagccgggtggagaac
ctggaggagttcgtcggggtcgcccgcgagttcgaggcgtccttcggcggcgtgccgggc
gaggaggcggacgacgcggacgggaccggcacggaggaggccgccgagccgacgctggtg
gacttcctggagcagatctccctcatcgccgacaccgaccaggtgcccgacgccgacgag
caggggggagcggtcacgctcatgacgctgcactcggccaagggactggagtttcccgtg
gtcttcctcaccggtctggaggacggggtcttcccgcacctgcgtacgctcggcgaccgg
tcggcgctggaggaggagcggaggctggcctacgtggggatcacccgggcgcaggagcgg
ctctacctcagccgggccgcggtgcgcagctcctggggggcgcccgcctacaaccccgcg
tcgcgcttcctggacgagattcccgcggagctggtgacctggcgccgtgcggagtcctcg
atgggcgcgttcggacggtccgcctctcccgtgcgcggttcggtggcgacccgcaggccg
gagcgccgggtgccgtcactgcgcccgggggacaaggtgaaccacgactcgttcgggctg
ggcacggtactcctggtcgacgggacgggggaccgtaccaaggtccgcgtcgacttcggg
gcggacatcggcgagaaggacctcatggtcaggttcgcgccgatcgagaagctctga
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