KEGG   Thermobifida halotolerans: NI17_019920
Entry
NI17_019920       CDS       T08032                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
thao  Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:thao00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thao02048]
    NI17_019920 (casA)
Prokaryotic defense system [BR:thao02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    NI17_019920 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1
Other DBs
NCBI-ProteinID: UOE19004
UniProt: A0AA97M3B0
LinkDB
Position
4475134..4476822
AA seq 562 aa
MRSTVTTETSHLSFDLVTRPWLPVQYRDGSQSELSLLEVFEQAPRLRRLVGDVPTQEFAL
VRLLLAVLHDAIDGPEDSDEWSELWTEAEEEQELPVDRIADYLEQHRDRFDLLHPTTPFF
QVADLHTAKNEIFSLDRIVADVPNGAPFFTMRARGVDRIGFAEAARWVVHAHAYDVSGIK
SGAVGDPRVKGGKGYPQGVGWAGNLGGILVDGTNLYETLLLNLVAFDTDNLRVTPDDRPA
WRHTPTTAAPTDAKELAGRPQGLRDLYTWQSRRIRLHYDAGGVYGALLTYGDPLPARNMH
NREPMTSWRRSPAQEKKLGLAQVYLPREHDPARSAWRGLGALVTGQVHGAEQRGEAATVV
RPRILDWVARLVNEEFLPKDYLIRARLIGAFYGTQQSVIDEIVDDQVAMAVVLLHERDSG
LGHTAVRAVEDAEAAVTVLGNLATALAEAAGAEPETPRATARDLGFGALDGPFRAWLSTL
TPGVDAAERRSAWQQQTHRIISGLGRQLVHEAGEAAWTGRVVEIKSGNSVWLNASHADLR
FRTELKKRLSMSSTEQTGEAAA
NT seq 1689 nt   +upstreamnt  +downstreamnt
ttgaggtccaccgtgacaactgaaacctctcacctctccttcgacctggtcacgcggccg
tggcttccggtgcagtaccgggacggttcccagagtgaactgtcgctgctggaggtcttc
gagcaggcgccgcgcctgcgtcgtctcgtcggggacgtccccacccaggagttcgcgctg
gtgcggctgctgctggcggtcctgcacgacgcgatcgacgggcccgaggactccgacgag
tggtccgagttgtggacggaggccgaggaagaacaggaactgccggtcgaccggatcgcg
gactacctggagcagcaccgcgaccgcttcgacctgctgcaccccaccaccccgttcttc
caggtcgctgacctgcacaccgcgaagaacgagatcttctcgctggaccggatcgtcgcc
gacgtccccaacggggcgccgttcttcaccatgcgggcccgcggtgtggaccgcatcggt
ttcgccgaggccgcacgctgggtggtgcacgcccacgcctacgacgtctccggcatcaag
tccggcgccgtgggcgacccccgcgtcaagggcggcaagggctacccgcagggggtgggc
tgggccggaaacctcggcggcatcctggtcgacggcacgaacctgtacgagacgctgctg
ctcaacctcgtcgccttcgacaccgacaacctcagagtcaccccggacgaccgtcccgcc
tggcggcacacacccaccaccgccgcccccaccgacgccaaggaactggcaggccgcccg
cagggcctgcgcgacctctacacctggcagagccgccgcatccggctgcactacgacgcc
ggcggcgtgtacggggcactgctcacctacggcgacccgctgcccgcgcgcaacatgcac
aaccgcgaaccgatgacctcatggcggcgcagcccggcccaggagaagaaactcggactg
gcacaggtctacctgccacgcgagcacgatccggcccgcagcgcctggcgtggcctgggc
gcgctggtaacgggtcaggtacacggagccgagcagcgcggtgaggccgccaccgtcgtg
cggccgcgcatcctcgactgggtggcccgcctcgtcaacgaggagttcctccccaaggac
tacctcatccgtgcccggctcatcggcgccttctacggcacccagcagtccgtcatcgac
gagatcgtcgacgaccaggtggccatggccgtggtgctgctgcacgaacgcgacagcgga
ctcggacacaccgcagtcagagccgtcgaggatgccgaagccgcggtcaccgtcctgggg
aacctcgccaccgcgctggccgaagccgccggagccgaacccgaaacgcctcgcgccacg
gcacgcgacctcgggttcggcgcactcgacggccccttccgcgcctggttgagcaccctc
acccctggagttgacgccgccgaacgccgtagcgcctggcagcagcagacccatcgcatc
atcagcggcctcggccggcagttggtgcacgaggcgggggaagcggcttggaccgggcgg
gttgtcgagatcaagagcggcaactccgtctggctcaacgcctcccatgccgacctgcgg
ttccgtaccgaactgaagaagaggctctccatgtccagcaccgagcagacaggcgaggca
gcagcgtga

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