Thermobifida halotolerans: NI17_023365
Help
Entry
NI17_023365 CDS
T08032
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thao
Thermobifida halotolerans
Pathway
thao03420
Nucleotide excision repair
thao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NI17_023365
03430 Mismatch repair
NI17_023365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thao03400
]
NI17_023365
Enzymes [BR:
thao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NI17_023365
DNA repair and recombination proteins [BR:
thao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NI17_023365
MMR (mismatch excision repair)
Other MMR factors
NI17_023365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UOE19601
UniProt:
A0AA97M407
LinkDB
All DBs
Position
5311939..5315304
Genome browser
AA seq
1121 aa
AA seq
DB search
MTDVYGPAQLARLLGLPEPTPEQAAVIAAPLSPGLVVAGAGSGKSETMAARVVWLVANGH
VRPENVLGLTFTRKAAAELAERVRKRLDQLRGAGTVPDEVLDGEPAVSTYHSYAIRLVGD
HALREAVEPNTRLVSPALAWQLAHRVVSTYDGPMDAVTSAPSTVVRDVLALAGELAEHLR
TPDDVREFGSWLRSRAAALKKIPAATRDLLATQRHREQLLPLLERFARLKTDREMMDYDD
QIALAARIAQRHPEVSLIERGRYHVVLLDEYQDTSHAQLVLLRALFGDGHPVTAVGDPCQ
SIYGWRGASAGNLISFPTHFPERPGRPAPVRQLATSFRNGEQVLEVAKRVAEPLRAEADT
VPVLYPGPARVGRGRVTCALLRTETEEAAWVAEQIDLALRESRDRHTAPDGLPWPEHDNR
GPLGHGDVAVLCRKRSQFPALRHALEERGIPVEVVGLGGLIEVPEVRDIVATLRVLHDPT
AGHELARLLTGPRWRLGPRDLVALNRRAVELAREARRDLRGQAAEETEEETDPLRQTVLD
LTAETGSLVDALDDLGPAEHYSETGYLRLCALADELRVLRGRISQPLPDLITDVERVLGL
DVEVGARPGRDQVAARADLDAFVDAAVRFSGSTDTPTLHAFLAYLDSAEDTEHGLAPGER
VGSSDTVKLMTVHAAKGLQWPMVVVPGLSQGQFPGVAKTVKSWTGRAAELPFALRGDRAG
LPDLPDVGADDLKGFMAAERDRELMEQRRLAYVAVTRAAFALLCTGHWWGREAKQRRGPS
VFLEEVREVCAAGAGRVAVWADPPEDGEGNPELAEDAPVVWPLDGDTRRDAAAAAAELVT
RYRDGGWERELNLLDRAVLRPGARRRTRDWARDVELLLRHRAAEPSGGQAVEVELPAHLT
VSSLVSLARDPAALARQIRRPLPRPPAPHTRRGTAFHTWLERRFGQQSLVDPDELPGAAD
DTAGGDADLDELQRRFEESAWADRTPLDVEVSFETIIGDRLVRGRMDAVFHDAEHDVYDV
VDWKTGQPPTTARERRAVAVQLAAYRVAWSRIVDVPLDRVRAAFHYVRHDRTVRPADLLD
ADGLAALINTVPEAGRGGGTEAGPTGGRPESGREERRAPLD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtctacggacccgcgcagctcgcgcggctgctcgggctgccggaacccact
ccggagcaggccgcggtcatcgccgcaccgctgagtcccggactggtggtggccggggcc
ggttccgggaagagcgagaccatggccgcccgggtggtgtggctggtcgccaacgggcac
gtgcgccccgagaacgtgctcggcctcaccttcacccgcaaggccgccgccgaactcgcc
gaacgcgtccgcaaacggctcgaccagttgcgcggcgcgggtacggtgcccgacgaggtg
ctcgacggcgaacccgccgtctccacctaccactcctacgcgatccgcctcgtcggtgac
cacgcgctgcgcgaggccgtggaaccgaacacccgcctcgtctccccggccctggcctgg
cagctcgcccaccgcgtggtcagcacctacgacgggccgatggacgcggtcacctccgcg
ccctccaccgtggtgcgcgacgtcctcgccctcgccggagaactcgccgaacacctgcgc
acccccgacgacgtgcgtgagttcggctcctggctgcgctcccgcgccgcggccctgaag
aagatccccgcggccacccgcgacctgctcgccacccagcgccaccgcgagcaactgctg
ccgctgctggaacggttcgcccggctcaagacggaccgcgagatgatggactacgacgac
cagatcgcgctggccgcccgcatcgcgcaacgccaccccgaggtctccctgatcgaacgc
ggccgctaccacgtggtgctgctcgacgagtaccaggacaccagccacgcccaactggtg
ctgctgcgggcgctgttcggcgacggccatcccgtcaccgcggtcggcgacccctgccag
tccatctacggctggcgcggcgccagcgcgggcaacctcatcagcttccccacccacttc
ccggaacggcccggcagacccgccccggtccgtcagctcgccaccagcttccgcaacggc
gagcaggtcctggaggtcgccaaacgcgtcgccgaaccgctgcgcgccgaggccgacacc
gtccccgtcctctacccggggccggcgcgcgtcggtcggggtcgggtcacctgcgcgctg
ctgcgcaccgagaccgaggaggccgcctgggtcgccgagcagatcgacctggcgctgcgg
gagtcccgcgaccggcacaccgcgcccgacggtctgccctggcccgaacatgacaaccgg
gggccgctcggccacggcgacgtcgccgtgctgtgccgcaagcgctcccagttcccggcc
ctccgccacgcgctggaggagcgcggcatccccgtcgaggtcgtcggcctgggcgggctg
atcgaggttcccgaggtgcgcgacatcgtcgccaccctgcgcgtgctgcacgaccccacc
gccggacacgaactcgcccggctgctcaccggaccccgctggcggctggggccgcgcgac
ctggtggcgctcaacagacgcgccgtggaactcgccagggaggcacgccgcgacctgcgc
ggccaggccgccgaggagacggaggaggagaccgacccgctgcgccagaccgtcctggac
ctgaccgccgagaccggaagcctggtcgacgcgctcgacgacctcggccccgccgagcac
tactccgagaccggctatctgcggctgtgcgccctcgccgacgagttgcgggtgctgcgc
ggccggatcagccagccgctgcccgacctgatcaccgacgtggagcgggtcctcggcctc
gacgtcgaggtgggcgcccgccccggccgggaccaggtcgccgcccgcgccgacctcgac
gccttcgtggacgccgcggtgcgcttctccggttccaccgacacccccaccctgcacgcg
ttcctcgcctacctggactccgcggaggacaccgagcacggcctggcccccggcgagcgg
gtcggctccagcgacaccgtcaaactcatgaccgtgcacgccgccaaggggctgcagtgg
ccgatggtggtcgtgccggggctcagccaggggcagttccccggcgtcgccaagaccgtg
aagagctggaccggcagggccgcggaactgccgttcgcgctgcgcggcgaccgcgcgggc
ctgcccgacctgccggacgtgggcgccgatgacctcaagggcttcatggctgccgagcgg
gaccgtgagctgatggagcagcgccgcctcgcctacgtggcggtgacccgcgccgcgttc
gcgctgctgtgcaccgggcactggtggggacgggaggccaagcagcggcgcggtccctcc
gtcttcctggaggaggtccgtgaggtgtgcgcggcgggcgcgggccgggtcgcggtgtgg
gccgacccgcccgaggacggcgagggcaacccggagctggccgaggacgcccccgtcgtc
tggccgctggacggagacacccgccgcgacgcggccgcggccgcggccgagctggtgacg
cggtaccgggacgggggctgggagcgggagctgaacctgctggaccgggccgtgctgcgt
cccggagcgcgccgccggacccgcgactgggcgcgcgacgtggagctgctgctgcgccac
cgtgccgccgaaccctccggcgggcaggccgtcgaggtggaactgcccgcccacctgacc
gtgtcctcactggtgtcgctggcccgcgaccccgcagcgctggcccggcagatccgccgc
ccgctgccgcgcccgcccgcgccgcacacccgccggggcaccgccttccacacctggctg
gagcggcgcttcggccagcagagcctggtggaccccgacgagctgccgggcgccgccgac
gacaccgcgggcggcgacgccgacctcgacgagctgcaacgccggttcgaggagagcgcg
tgggccgaccgcactccgctggacgtggaggtctccttcgagaccatcatcggcgaccgg
ctggtgcggggccgcatggacgcggtcttccacgacgccgagcacgacgtctacgacgtg
gtggactggaagaccggacagccgcccaccaccgcccgggagcgccgcgcggtggccgtg
cagttggccgcctaccgcgtggcctggtcccggatcgtcgacgtgcccctggaccgggtg
cgcgcggccttccactacgtccgccacgaccggacggtccgccccgccgacctgctggac
gccgacgggctggccgccctcatcaacacggtcccggaggccgggcggggaggcggcacc
gaggcggggccgaccggcgggcggcccgaatccggccgcgaagaaaggcgagcccctctt
gactga
DBGET
integrated database retrieval system
