Thermobifida halotolerans: NI17_024115
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Entry
NI17_024115 CDS
T08032
Name
(GenBank) relaxase domain-containing protein
Organism
thao
Thermobifida halotolerans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
TrwC
AAA_19
TraI_hel_assoc_N
Viral_helicase1
AAA_22
UvrD_C_2
NTPase_1
AAA_11
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UOE22253
UniProt:
A0AA97M6H2
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All DBs
Position
pTH1:complement(30937..34548)
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AA seq
1203 aa
AA seq
DB search
MAMVTVLGPDAAQVDYRLSPQCGHDHARAADAALTYRLAQQAGARPIERVGAGWQEFGAE
AGTVLVDEDDIDQVRTVMAGRSPQTGRWLVKPKLAVVSAAKLPARPLVEAIRAAADVQGV
DAAALIDGPQLVKRYGRLERGLRRDGEAHRAPVADLEAVAEAAGIDLEDVYEPQELAAAR
KHADERVRVGNRGYDVTFDIPKSVSVLWGLADAATAARIEELYLQTVRDSVAALESWTGY
VMSGHHGDGRTAQRLDTSGLVGTITLHRTARPVAGQVGDPHLHAHVMIANLARGSDGKWR
TIAAGGRDLHRHVAAVGQYARARLRQLLTAEFGVSWERNPDSGRWELSGIDEQVRRLYSR
RARQITEEVGECASAEVSRVAARRTAGAKIDLSPEQERAAWRQRAHEAGLSPEALVADVL
GRMPPGGAPAVGPSGPPHRPDLDAVAAAVWDPETGVTAQTKVVTRAKVMAAVADALGPGL
GGIDELEALTEAVLAHPYAVRLPDAGPSHMAHADRYTSAEVVGAEQTITRSAQARLNAGA
AMADRGLAARALHDWQQHKGFTLSTEQTRVVERLVGSGHGVDAVVGVAGAGKTTVMSAAR
AVWEAAGYRVEGAAVAAVAAAGLRAEAGLSSATLAAWMRRIDDGPGLDGVDVLVIDEAAM
VADRDLARLVAEAERTGTKLVGIGDPLQLRSIGVGGAFGRVHELVDGLVLTENRRQRGQV
DRAALAAWRDGARRTALALWGEHGMIHAPADADAAHAQMAAAWWADRQRHTDPHDAVEQL
LMLAATNSDAAALNAHARALARARGLLTGADVTYRLRGGEHLSLAAGDQVRLRRNDYRSR
HSSDPDVLNGYRGVVTAVDARRGALVEWRHNGTVTSAWISPAQIARGDLVHGYAITIAAA
QGLTADRCHVYGLGADAHSLYPAMSRARVRTDLYLPACELGSEQVRLRLGEASTAEEALH
RVITAYATTLTDTPDSLVLDEIADNRGLTHRTAPTPTPSPLSLEDIRAGRGPAAQAAAEE
VAALRQQATELEAALSHLRTQAREAVARAQAGRMRLLLQGTTPDAAREAAEAAQTALSNT
LDNLHQTRRHAEALWQQALDADLRDHQDVRQHEQRERELVALEPLALAHDLTRADLARLD
KTQLQELRRQHSLQTADLASQPAPRTASRQSSGAPRPAHGVPRSPTSYPLPPPSAVRRPH
GPR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatggtgaccgtgctgggcccggatgccgcccaggtggactaccgcctgtccccg
cagtgcggtcacgaccacgcccgggctgcggacgcggcgctgacctaccggctggcgcag
caggccggtgcgcgccccatcgaacgtgtcggcgcgggctggcaggaattcggcgcagag
gcgggcacggtcctggtcgacgaggacgacatcgaccaggtacgcaccgtcatggctgga
cgctctccgcagacgggccggtggctggtcaaacccaagttggccgtggtctccgcggcg
aagcttcccgcccgccccctggtggaggcgatccgtgccgcggccgacgtccagggcgtc
gacgcggcggcgctgatcgacggcccccaactcgtcaaacgctacggtcgactggagcgg
gggctgcggcgtgacggggaggcccaccgcgcgcccgtcgcggacctggaggccgtggcc
gaggccgctggaatcgacctcgaagacgtctacgaaccacaggagttggccgccgcccgc
aaacacgccgacgagcgggtgcgtgtcggcaaccgcggctatgacgtcaccttcgacatt
cccaagtcggtgagcgtgctgtggggactggccgatgccgccaccgcggcccggatcgag
gagttgtacctgcagaccgtccgcgattcggtcgcggcgctggagtcgtggaccggctat
gtgatgagcggccaccacggggacggccgcaccgcccagcggctggacaccagcggcctg
gtcggcacgatcacgttgcaccgcaccgcccgcccggtcgccgggcaagttggggatccg
cacctgcacgcccacgtcatgatcgccaacctcgcgcgtggctccgacggcaagtggcgc
accatcgccgcaggcggacgcgacctgcaccgccacgtcgcggccgtgggccagtatgct
cgcgcccggctgcgtcaactgctcaccgccgagttcggcgtgtcctgggaacgcaatccc
gacagcggacggtgggaactctccggcatcgacgagcaggtgcggcgcctgtactcccgg
cgtgcccggcagatcaccgaggaggtcggggagtgcgccagtgccgaggtcagcagagtc
gcggcgcgacgcaccgccggagccaagatcgatctgtctcccgaacaggagcgtgccgcc
tggcgtcaacgcgcacacgaggcgggtctctcccctgaggccttggtcgccgacgtactg
ggacgcatgcctccggggggcgctccggccgtggggccctccggcccgccgcaccgcccc
gacctcgacgctgtggccgcggcggtgtgggatccggagaccggggtgaccgcccagacc
aaggtggtcaccagggcgaaggtcatggccgccgtcgccgacgccctcggccctggactg
ggcggaatcgacgagttggaggcgctgaccgaggcggtgctggcccacccctacgcggtg
cgactgcctgatgcgggaccgtcccacatggcgcacgccgaccgctacacctccgctgag
gtcgtgggtgccgagcagaccatcacccgctcggcccaggcccgtctgaacgcgggcgcg
gccatggccgaccgcggactcgccgcgcgcgccctgcacgactggcagcagcacaagggc
ttcaccctctccacagagcagacccgcgtggtggagcgcctggtcggttcaggccacggc
gtcgatgccgtggtcggcgtggccggggcgggcaagaccaccgttatgagcgcggcccgc
gcggtgtgggaggcggccgggtaccgggtggagggcgcggccgtggccgcggtggccgcc
gccgggctgcgtgccgaggccggcctctcctcggccaccctggccgcgtggatgcgccgc
atcgatgacgggcccggtctggacggggtggacgtgctcgtcatcgacgaggccgccatg
gtggccgaccgcgacctggcccgcttggtcgccgaggccgaacgcaccggcaccaaactc
gtggggatcggagatccgctgcaactgcggtcgatcggcgtgggcggtgcgttcggccgc
gtgcacgagctcgtcgacggcttggtgctcaccgagaaccgccgtcagcgcggacaagtg
gaccgggccgcgctggccgcgtggcgcgacggcgcccgccgtaccgccctggcgttgtgg
ggcgagcacggcatgatccacgctcccgccgacgccgatgccgcgcacgcgcagatggcc
gctgcctggtgggccgaccgccagcgccacaccgacccgcacgacgcggtcgagcaactg
ctcatgctcgccgccaccaacagcgacgcagccgcgctcaacgcccatgcccgcgctctc
gcccgcgcccggggcctgctcaccggagcggacgtcacctaccgcctgcgcggcggagaa
cacctgtccctggccgcgggggatcaggtgcggttgcgccgcaacgactaccgttctcgc
cacagcagcgaccccgacgtgctcaacggctaccgcggggtggtgaccgccgtggacgcc
cgccggggggcactggtggagtggcggcacaacggcacggtcacctcggcctggatcagc
cccgcccagatcgcccgtggtgacctggtgcacggctatgcgatcaccatcgccgccgcc
caaggcctgaccgctgaccgctgtcacgtctacggcctgggcgctgatgcccacagcctc
taccccgccatgtcccgcgcgcgggtgcgcaccgacctgtaccttcccgcctgcgaactc
ggatccgagcaggtccggttgcgtctcggtgaggccagcaccgccgaggaagccctgcac
cgagtcatcaccgcctacgccaccaccctcaccgacacccctgacagcctggtcctcgac
gaaatcgcggataaccggggcctgacccaccgcaccgcgcccactcccacgccgtctccg
ctcagcctggaagacatccgcgccgggcgaggccccgccgcccaggccgcggccgaagag
gttgccgcgctgcgccagcaggccaccgaactggaggccgctctttcgcacctgcgcaca
caggcccgagaagccgtcgcccgcgcccaggccggacggatgcgactgctgctgcagggc
accactccggacgcggcccgagaagcggccgaggccgctcagacagcgctgtcgaacacc
ttggacaacctccaccagacccgccgccacgccgaggccctgtggcagcaggccttggac
gccgacctacgcgaccaccaggacgtccgccaacacgaacagcgtgagcgcgaactggtc
gccttggagcccctggccctggcccacgacctgacccgcgccgaccttgcccgcctggac
aagacccagttgcaggagttgcggcgccagcacagcctccaaaccgccgacctggcttct
caaccggcaccacgcactgcttcccggcaatcctccggcgccccccgccccgcccacggc
gtgcctcggtctcccacgtcctaccccctccctccgccgtcggcagtccgtcgcccccac
ggaccccgctga
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