Thermobifida halotolerans: NI17_024155
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Entry
NI17_024155 CDS
T08032
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
thao
Thermobifida halotolerans
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UOE22261
UniProt:
A0A399FVE4
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Position
pTH1:complement(45023..46783)
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AA seq
586 aa
AA seq
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MRDDRRTLGLFGDPAPLIGLGALALALLGLGVVWLGGTLGAWASGAGWNPPRFGPGMIIL
LLRGKPLWPGADSGWIAAGILALALLVVALASLLAAWAVRRWRASVPGLATRAHVQDFAP
KAATTKARRLRRSLQGVPDSQLTGADTGLLLGNLAGTRMELRSSFEDVTVVIAGPRVGKT
SRIVANPVLDAVGPCLVTSVRPDVYTITARHRERQGGRVWLFDPQNITHGEQTMWWDILS
MARTLEGARRLAAHLTRAMGKSHSGDGEFFTAAGRSTLTNLLHAAALDNRPLADMLNWTS
DQRDRTAVYILRGHGLQAMADALERMTKLAQETQDGVYEHVRQAVASLYDPDIAAWVTPQ
PGAEEFDPAAFVESKDTLYMLSKEGGGGASGILAALTDACLDAGVRLAEASRGGRMDPPL
LAMLDEAANICRIEDLPNKYSIFGGFGLNVTTVLQSYDQGADAWGREGMKKLWGAATVKL
LGAGMDDYRFLDELSHLVGMRAIVEQSFTTSGGGTSSTHSRRRERIMDAAEFRELDKKQA
LLLATATRPALLDLQAWYERPDAEQLQKDKDLMERRIEEQAAAARR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgatcgccgcaccctgggcctgttcggtgatcccgccccgctgatcggcttg
ggcgcgctcgccctggccctgctggggctgggcgtggtgtggctgggcggcaccctgggc
gcatgggcctccggcgcgggctggaatccgccccggttcggccccggcatgatcattctg
ctgctgcgcggcaaaccgctgtggcccggcgccgactccggttggatagcagccggaatc
ctggccctggccctgttggtggtggcactcgccagcctgctcgcagcgtgggcggtgcgc
cggtggagagcctccgttcccgggctggccacccgcgcccacgtccaggacttcgccccc
aaggccgccaccaccaaggcacggcgactgcgccgctccctccaaggcgtgcccgactcc
caactcaccggagccgacacaggtctgctgctcggcaatctggcgggcacccgcatggaa
ttgcgctcctcgttcgaagacgtgaccgtggtgatcgccgggccccgcgtcggcaagacc
tcccgcatcgtcgccaaccccgtcctggacgcggtggggccgtgcctggtcacctcggtg
cgccccgacgtctacaccatcaccgcccgccaccgcgaacgtcagggcgggcgggtgtgg
ctgttcgacccgcagaacatcacccacggcgaacagaccatgtggtgggacatcctgtcg
atggcccgcaccctggaaggcgcccgccgcctggccgcacacctgacccgcgcgatgggc
aagtcccacagcggcgacggcgagttcttcaccgccgccgggcgctccaccctcaccaac
ctgctgcacgccgcggccctggacaaccgtccgctggccgacatgctcaactggacctcc
gaccagcgcgaccgcaccgccgtctacatcctgcgcgggcacggcctgcaggccatggcc
gatgccctggaacgcatgaccaaactcgcccaggagacccaggacggcgtctacgagcac
gtccgccaagccgtggccagcctgtatgacccggacatcgccgcctgggttacccctcag
ccaggggcggaggagttcgacccggccgcgttcgtggagtccaaagacaccctctacatg
ctgtccaaggagggcggcggcggcgcgtccggcattctggccgcgctcaccgacgcctgc
ctggacgccggggtccgcctggccgaagcctcccgcggcgggcggatggacccgccgctg
ctggcgatgctggatgaagccgccaacatctgccgcatcgaggacctgcccaacaagtac
tcgatcttcggtggcttcggcctcaacgtcaccaccgtgctgcagtcctacgaccagggc
gctgacgcctgggggcgggaaggtatgaagaaactgtggggcgcggccacggtcaaactg
ctgggcgcgggcatggacgactaccggttcctcgacgaactctcccacctggtgggcatg
cgcgccatcgtcgagcagtccttcaccaccagcggcggcggcaccagcagcacccactcc
cgacgccgggagcggatcatggacgccgctgaattccgcgaactggacaagaagcaggcg
ctgctgctggccaccgccacccgcccagccctgctcgacctgcaggcctggtacgagcgc
cccgacgccgagcagttgcaaaaggacaaggatctgatggagcggcgcatcgaggaacag
gccgccgcagcgaggaggtag
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