Thalassotalea sp. PS06: FNC98_00230
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Entry
FNC98_00230 CDS
T06100
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
thap
Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_00230
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FNC98_00230
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA
AAA_16
ResIII
AAA_10
AAA_30
CbiA
FtsK_SpoIIIE
AAA_7
nSTAND3
AAA_6
T2SSE
AAA_19
P-loop_TraG
SRP54
NTPase_1
AAA_5
nSTAND_NTPase5
AAA_11
RF-1
AAA_31
Thymidylate_kin
Zeta_toxin
AAA_18
Zot
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QDO99907
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Position
54544..56049
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AA seq
501 aa
AA seq
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MSEANLDKFKQLMVEGYSVDGPSMTIGAAKLADQVFADLPIHLSLSSLSRHGLITGATGT
GKTKTIQVLAEQLSEQGVNVLLMDMKGDLSGLGMPGEANESINKRHQQIGLDFAAKPYPV
SLLTLSSELGIQLKATVAEFGPDLLARILTLSDAQKGLLAMLFQYCDDKQYPVVDLDDLK
KLLQYISNEGKEEFSSEYGRFSNASTGAILRKLIALEQQGADRCFAERSFAIEDLLSANS
NAGLVSILRLADIQSKPMLFSTFMLQLLGEAYQWFPEVGEVDKPKLVIFIDEAHLIFSGQ
SPELASQLESMVKLIRSKGVGLFFVTQNATDISPGVLSQLGLKIQHAVRAFTAKDRKALK
QSVENLPDSEFYDATDALTNLGVGEAIVTALDKKSVPTPLVTTLLRAPQSRMGVLTDTEV
STLVSQSPISDKYNEKLNRESAYEILNEKLANAAATAKQREDNKPATTKKSSSSASAIVK
MLTSATFVRGVFGLLNKMISK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagcgaatctagataaatttaagcagcttatggtagaaggctatagcgttgac
gggccttcaatgactattggcgccgcaaagcttgccgaccaggtattcgcggatttaccc
atacacttatccctatcttccttatctcgccacggtctgattaccggcgcaaccggtact
ggtaaaaccaaaaccatccaggtgctggcggagcaattaagcgagcagggcgtaaatgtg
ctgctgatggatatgaaaggcgatttgagtggccttggcatgcctggcgaggcaaatgaa
tcgataaataaaaggcaccaacaaatcggtttggactttgctgcaaaaccctatccggtt
tcactgttaaccttatccagcgagcttggcattcagctaaaggcaacggtagccgagttc
ggtcctgatttacttgccagaatattgaccctgagcgatgcgcaaaaaggcctgctggcg
atgctatttcagtattgtgacgataagcaatatccggtggtcgacctggatgacctgaaa
aagctactgcaatacatatccaatgaaggtaaagaggaattcagtagcgagtacggacgt
ttttctaacgcgtctactggcgccattttaagaaaactgattgcgctagagcaacaaggc
gctgatcgttgctttgcagagcgttcatttgctattgaagatttattgtctgcaaattcg
aatgccggattagtttccatattgcgcctagcggatatccagtcaaaacctatgttgttc
tctacttttatgctgcagctgctgggcgaagcttatcaatggtttcccgaagttggtgag
gttgataagccgaagctggtgattttcattgatgaagcccatttgattttttctggccag
tcgccagagttggcaagtcagttagaatccatggtgaagttaattcgttcgaaaggggtt
ggcttattttttgttacccagaatgcgaccgatatttctcccggcgtattgtcgcagcta
ggattgaaaatacagcatgcggttcgtgcctttaccgccaaagatagaaaagccttaaag
caatcagtagaaaacctgccggattcagagttttatgacgcgacggatgcgttaaccaac
ctgggagttggcgaggctatcgttaccgctttggataaaaaaagtgtgcccacacccttg
gtaaccacattactacgtgctccccaaagcagaatgggagtgcttaccgataccgaggta
agcactttggtttcccagtcgccaattagcgataagtataatgagaaactcaaccgcgaa
agcgcctatgaaatcctcaatgaaaaacttgcgaatgccgcagcaacggcgaaacaacgt
gaagataataaacctgcgacaaccaaaaaatcatcttcttcggcgtccgcaattgtgaag
atgttgaccagcgcaacctttgttcgcggtgtctttggattgttgaacaaaatgatcagt
aagtaa
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