Thalassotalea sp. PS06: FNC98_00305
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Entry
FNC98_00305 CDS
T06100
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03030
DNA replication
thap03410
Base excision repair
thap03420
Nucleotide excision repair
thap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNC98_00305 (polA)
03410 Base excision repair
FNC98_00305 (polA)
03420 Nucleotide excision repair
FNC98_00305 (polA)
03440 Homologous recombination
FNC98_00305 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thap03032
]
FNC98_00305 (polA)
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_00305 (polA)
Enzymes [BR:
thap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNC98_00305 (polA)
DNA replication proteins [BR:
thap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FNC98_00305 (polA)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FNC98_00305 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNC98_00305 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QDO99919
UniProt:
A0A516H815
LinkDB
All DBs
Position
complement(67587..70334)
Genome browser
AA seq
915 aa
AA seq
DB search
MSQSSPYILVDGSSYLFRAYHVPYLQALSTADGHPTGAITGVLNMLKSLKKDYPDGKVIV
VFDAKGKTFRNDLYPEYKANRPPMPDDLRCQIAPLHNIIRAMGYPLLVIEGVEADDVIGT
LAEQASAQGLETVISTGDKDMAQLVTEHVTLINTMTSVTMDVDGVIEKFGVRPDQIIDYL
ALMGDKVDNIPGVQKCGPKTAVKWLTEYETLDGVIANADKIKGKVGENLRAAVEQLPLSY
ELATIKTDVELEQNLADIKSTDPEVDTLRSLLEQFELKRLLAELNAGAVATDSSASADVA
EEEELTPLNEDIPSNYQIIFSEDELDNWVKKLTESGSFAFDTETTSLNYMQAKLVGLSFA
TEPGEAAYIPFGHDYEGAPEQLDIDLVLGKLKPLLEDKSLIKIGQNLKYDANVLNNYDIA
LTGIGFDTMLESYCLNSVATRHNMDALAEKYLDYKTVHFEDIAGKGAKQLTFNQIDIDKA
GHYAAEDADITLRLHQVLWPKLEKSEKQCSVFKDIELPLLPVLARMEQHGVLIDADLLTE
QSQYIATRLDEIEVAAHNIAGKSFNLSSPKQLQTILFEEQQIPVIKKTPKGAPSTAEEVL
QELALDYPLPKLILEHRGLAKLKSTYTDKLPLMIDNNSGRVHTSYHQAVTATGRLSSTDP
NLQNIPIRSDEGKKIRQAFIAPENHKVVAIDYSQIELRIMAHLSNDPGLLSAFAQGRDIH
QATAAEIFGIELEEVTSDHRRSAKAINFGLIYGMSAFGLSKQLGIPRGRAQDYMDKYFER
YPGVLTYMEDTRQLANEQGYVETLFGRRLFLPEIKSRNGARKKAAERAAINAPMQGTAAD
IIKKAMLAVDAWIIEQNDPRIKMTMQVHDELIFEIHQDIVDEVTDKLVQIMNDAVELNVP
LIAESGIGDNWQQAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcatcaccttatatccttgtcgacggttcttcttatctgtttcgtgcctac
cacgtaccttatttgcaggctttgtcgactgccgatggccacccaacgggagccataact
ggcgtattgaatatgcttaaaagtcttaaaaaggattatcctgacggtaaggttattgtg
gtatttgacgcgaaaggcaaaacctttaggaacgacctctatccggaatataaagcgaac
cgcccgccgatgcctgacgacctgcgttgtcagattgcaccattacataacattattcgt
gccatgggttatccattgttggttattgaaggcgttgaggctgatgatgttattggcacc
ttggctgaacaggccagcgcccagggtttagaaacggttatttcaaccggcgataaagat
atggcgcaactggtaacggaacacgttacccttatcaatactatgaccagtgtcactatg
gatgtggatggtgttattgaaaagtttggcgttcgtccggatcaaatcatcgattacctg
gcgctgatgggcgataaagtcgataacattcccggtgtacaaaaatgtggcccgaaaacc
gctgtaaaatggcttaccgaatatgaaactttagatggcgttatcgccaatgccgataag
ataaaaggcaaggttggtgagaatcttcgcgcagcggttgaacagttgcctttgtcttat
gaattggcaaccatcaagacagatgtagagcttgagcaaaacctggcggatatcaaatcc
acagaccctgaagtggataccctgcgctctttactggagcaatttgagcttaagcgcctt
ttggctgaattaaacgccggcgcagtagctaccgattcttctgccagtgcagacgttgcc
gaagaagaagagttaacgccattaaatgaagatatcccgagcaattatcagattatcttt
agcgaagatgagctagataactgggtgaaaaagctaaccgaaagcggcagctttgcattt
gatactgaaaccacatcactcaattatatgcaggctaaactggtggggctttcttttgcc
actgagccaggtgaagcggcatacatcccattcggtcacgattatgaaggtgcgcctgaa
cagttagatatcgacctggtgttaggcaaactaaaacctttgctagaagataagtcgtta
ataaaaattggccaaaacctgaaatacgatgccaatgtcctgaataattacgacatagca
ttaaccggtatcggttttgacaccatgttggaatcctattgtttaaacagtgtcgctacc
cgccataatatggacgcgctagccgagaaatatcttgattataaaaccgttcactttgaa
gatatcgccggtaaaggtgcgaaacagctaacctttaatcaaattgatatcgacaaggct
ggccactacgccgctgaagatgcagatatcaccttacgattacatcaggtgctttggcca
aaactcgagaaaagtgaaaagcaatgctcggtatttaaagatatcgagcttccactgtta
ccagtattggcgagaatggagcagcacggtgtgcttattgatgctgacctgttaaccgag
cagagccaatacattgcaacccgccttgatgaaattgaagtggcggcacataacattgcc
ggtaaaagctttaacttaagctcaccaaaacaactgcaaaccattttatttgaagagcag
cagatcccggttattaagaaaacgccaaaaggtgcgccatcgactgccgaagaagtatta
caggaactggcgctagattacccattacctaagctgatccttgagcatcgcggattagcc
aaactgaaatccacctataccgacaaattacctttgatgatcgacaacaattctggtcgg
gtacatacctcatatcatcaggcggtaacagcaacgggtcgtttatcgtcaacggatccg
aatttgcagaatattccgattcgctctgacgaaggtaagaaaatccgtcaggcatttatc
gccccagagaaccacaaggttgtggcaatcgattactcacaaattgaattgcggattatg
gcacacctttccaatgatccaggtttactaagtgcctttgcccaaggccgagatattcac
caggcgaccgctgcggaaatttttggtatcgaacttgaagaagtcactagtgatcaccgt
cgcagtgccaaggccattaacttcggactcatttacggcatgtctgcgtttggcttatct
aagcagttaggaattcctcgcggccgggctcaggattacatggacaagtactttgaacgc
tacccgggtgtgcttacttatatggaagacactcgccagctggcaaacgaacaaggctat
gttgaaaccttatttggtcgtcgtctgtttttaccagaaattaaatcccgaaatggtgcc
cgcaaaaaagccgcagagcgcgcggcaatcaatgcgcctatgcaagggacagccgccgac
atcattaagaaggcgatgctggccgtcgacgcctggattatcgagcaaaatgaccctcgc
attaagatgacaatgcaggtacacgatgaattaatctttgaaattcatcaagatatcgtt
gatgaggttactgacaagctagttcagatcatgaatgatgcggttgaattaaacgttcca
ttaatcgccgaatcgggaattggcgacaattggcaacaagcccattaa
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