Thalassotalea sp. PS06: FNC98_08685
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Entry
FNC98_08685 CDS
T06100
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNC98_08685 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_08685 (recD)
Enzymes [BR:
thap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNC98_08685 (recD)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNC98_08685 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
PhoH
RecD_N
SLFN-g3_helicase
AAA_22
ResIII
PIF1
DEAD
AAA_25
FtsK_SpoIIIE
nSTAND3
Zeta_toxin
DUF87
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QDP01395
LinkDB
All DBs
Position
complement(1947256..1949217)
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AA seq
653 aa
AA seq
DB search
MTNKYQENQQAQQSFLFADEAPVETWQHYLDKLPNVLKLKKQLADIEAIDYFLAKEILAT
SSESRFDDQEFSALFHLFVALSQFQRQGHTCLPLATVAGQLWFESSEGSDEAYPGYVFAE
LAFLDDILARFIGACTEQGLVVVDNQQLYLRRYWRFETELADVINHRLRAEAISSQQSDT
DSNADSNKAAADIVQQLFPHSEENETDWQKVAVANALNKSFSIIAGGPGTGKTYTVTKLI
AAIIMQSKVNPDIKLVAPTGKAAQRLSESIAAAVEGFRKDGSIPDSVLDAIPLTGLTLHR
LLGVIPNSPNFRHHQDNPLSCDVVIVDEVSMVDLPLMTRLFRALPEKCKVVLLGDCQQLP
SVETGSVLADLATSSVTRYSVENANYIRQLTSQNIAASESFNCDYLTYLTKSRRFQGSGG
IGLLAKAIIDGDSKQSWQLLTKDTKQLQLASEKFLSKYVQNLTQDYYREIFLQTDLSAAY
AKFQGFRILTPSRSGEGGIESLNEMIEQELQSQGFKAYGQTLYRGRPIMITQNHYKLQLF
NGDIGMIWPDADGNLKAHFPDGDQFRSVSIPRLPPFETVFAMTIHKTQGSEFASVAMVIP
EKGSTRLLSRELIYTGLTRAKSHFQLFSRKKEFIEGIEKRVSRCSGLGSRIQR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaatatcaggaaaaccagcaagcgcaacagagctttttatttgccgatgag
gcgccagtcgaaacctggcaacattaccttgataaattacctaatgtgttgaaactgaag
aaacaacttgccgatattgaagccattgattacttcctggcaaaagagatccttgctacc
agcagtgaatccagattcgacgatcaagagttttcggctttgtttcatttatttgtcgcg
ctctcgcagtttcaaaggcagggacatacctgcttaccgttggcaacggtagccgggcag
ttatggtttgaaagtagcgaaggttcagatgaggcttatcccggctatgtttttgcggaa
ctcgcattcttagacgatattcttgcgcggtttatcggtgcatgcactgagcaaggatta
gtggttgtcgataatcaacagctttatttgcgacgttactggcggtttgaaacagaatta
gccgatgtcattaatcatcgattacgggctgaggcaatatcttcacaacaatccgatact
gacagcaatgctgacagcaataaagccgccgctgatatcgtgcaacaattatttcctcac
tcagaggaaaacgaaaccgattggcaaaaggttgcggtggctaatgccttaaataaatcg
tttagcatcatcgctggggggcccgggacgggaaaaacgtatacggtcactaaactcatt
gcggcgataatcatgcaatcgaaggtaaatcctgatatcaaactggttgcaccaaccggc
aaggctgcgcaacgtttaagtgaatccattgccgctgcagtggaaggctttcgcaaagat
ggcagcatacccgattcggttctggatgcgattccattaaccgggttgactttgcataga
ctgttgggcgttatccccaatagtccaaatttccgccatcatcaggataatcctttatcc
tgtgacgtcgttatcgttgatgaagtatctatggtggacttaccattgatgacccgactg
ttcagagcgcttccagaaaaatgtaaagtcgtattgttaggtgactgtcagcagttacct
tcagtggaaaccggaagtgtgcttgccgatctggcaacctcatcggtaacccggtattcc
gttgagaatgccaattatattcgtcagttaacctcacaaaacatcgctgcgagtgagagc
tttaattgcgattaccttacgtatctcaccaaatccagacgtttccagggcagcggtgga
atcgggttgttggcaaaggctattattgacggtgacagtaaacagtcctggcaattattg
actaaggataccaaacagttacagctggcatcggaaaaattcctgagcaaatatgtgcaa
aatctcactcaggattattatcgagagatatttttacaaaccgacttatctgcggcgtat
gccaagtttcaggggtttagaattcttacgccaagccgatcaggtgagggtggcattgaa
tcgctaaatgagatgatagagcaggaattacagagtcaggggtttaaagcctatggccaa
accctttaccgcgggcgaccaattatgatcacccagaaccattataagttacagttgttt
aatggtgacattgggatgatttggccagatgccgatggcaacttaaaagcccattttcct
gacggcgatcagtttcgttcggtttccattcctcgtttaccgccattcgaaacggttttt
gcaatgaccatccacaaaactcagggatctgagtttgcaagcgttgccatggttattcct
gaaaaaggtagtactcggttattatccagagaactgatttataccgggcttacccgggca
aaatcccacttccagttattttcaaggaaaaaagagtttattgaggggatagagaaacgt
gtaagccgatgttcaggtctgggctcgagaattcaaagatag
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