Thalassotalea sp. PS06: FNC98_08695
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Entry
FNC98_08695 CDS
T06100
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNC98_08695 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_08695 (recC)
Enzymes [BR:
thap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNC98_08695 (recC)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNC98_08695 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QDP01397
UniProt:
A0A516HCA5
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All DBs
Position
complement(1952987..1956490)
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AA seq
1167 aa
AA seq
DB search
MLYLYPANRMEDLLLLFAKVQQISPLPPLVEELVLVQNQGMQHWLNMQQASANRVSMNTR
FSLPAQFFWKSLRTLCIDNLPEQSPYSRDVLAWRIELLLQSDTITQDENCQPLTTYWNGE
SAHQKDLRRYQLARKIADLYEQYLIYRPDWIHSWCVGERVDIEEGAGRETERWLALIWQQ
LHQHIPYDPQQLIKQAIDNLADKAEHLPQRISLFGLNAIAPLWMEFLAALGEHIDIHFYQ
LNPCIEYWGDIKSEKSQAKQDFQQLLSGWPNVDDISNEVNPLLANLGQQGKDLLSQLQQF
EHIEIPVYERLAESQLQTSSVLTQLQHDILSLEDRRGVFATGEQQPLVDDSIVVTSAHSA
LREVQGLHDYLLHQFNNDPTLTPKDVLVMCPQVEDYAPYIDAVFVRGWEDIGENIPPLPC
SIADRISKDSEPLVNGFNELLNLPDSRFEVSRLIAYLQLKPVQKRFNFNDADIELISFWL
QQANIHWGLDAEHKSRQIGIEEASDQFTWQLGLTRLIRGFAYSDQLTLEGDNLYLPWVEG
DNSELLGKFLQFIEQLQILHKNLHSSRSAEQWHQMLTEMLDSLFDEDENDPDLGLTIVRK
AIDDFHEHCQQANYHAPISLLPVREYLNTHFSEPDPGRQFMIGQITFCSMLPMRSIPFKL
VAILGMNDGQFPRQRQPIGFDLMAMTAGRLGDRSLHKDDRYLFLEALISARSHLYISYQG
RDIKNNGERQPSIVLRELMDYLEQGFGWRFSPEHQLRQLPMQSFANENYSPDNAWASFDG
KWLNLAPANVKTDTASDEPLIEIAADHHQENQGANNRSSDETSDEITDEDLLQALRHPAK
IFGTRQLNLTFAYQQEPLSDVEPFAPSGLEKFNYKQQILGTMLQSADPNNPQLVDEITVK
LDNIQRLSLLSGAFPDNHEMNSTLESWRLMVEAFSAYVAGIIDAQQVNGVAIELPFKVAV
TTEENEQQIVSCSVPLLQHPKGYSITYTKSASANDADFCRIYVGHVLACVYAKNQTGIAN
QSTEPNVITQGFYLNEKTMKVEQIQLTYWQDAEQRLQALMSGFQQVLRSPKPINMAIAKK
HFWNRNKFQSGFMNQHDFEKLWYQEKYGQSMATDPYLQYFFKTCPQLQQILPDLIALYQV
FFERLSINNVDLAVEQQSGADAASEKE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttgttatatctttatcctgccaatcgaatggaagacttactgctgttatttgcaaaagta
cagcagatatcgcctttacctccacttgttgaagaacttgtattggttcagaaccaaggc
atgcagcattggctgaatatgcaacaggcaagcgcgaaccgggtcagtatgaacacccga
ttttcattgccagcgcaatttttctggaaatctttacgcaccctttgcatcgataattta
ccagagcaatcgccgtattctcgggatgtattggcgtggcgtatcgaattgttattgcag
agcgacacgattactcaggatgaaaactgtcaaccactaaccacttattggaatggtgaa
tctgcgcatcaaaaggatctgcgacgttatcaactggccagaaagattgccgatttgtac
gagcagtacttaatttatcggcccgattggatccatagttggtgtgtaggcgagcgcgta
gacattgaagaaggagctggtagagaaacagaaagatggcttgctctgatatggcaacaa
ctgcatcaacacattccgtacgatccacagcagttaattaagcaggcgatagacaacctg
gccgataaagccgagcatttgccgcaacgtatttcattatttggactaaatgccatagct
ccgttgtggatggagtttttagccgctctgggtgagcatattgatattcacttctatcaa
ttaaacccttgtattgaatattggggcgatatcaaatcggagaaatctcaggcgaaacag
gactttcaacaattattgtcgggctggccaaacgttgatgatatcagcaacgaggtaaac
ccattactggccaatctcggacaacaaggaaaagacttgttgtcgcaattgcagcagttt
gagcatattgaaatcccggtatacgagcgattagcagaatctcagttacaaacatcaagt
gtgttaactcagcttcagcatgacatcttgagtcttgaagacagacgtggggtatttgca
actggcgaacaacaaccgctggttgatgacagtattgttgttaccagtgcgcatagtgcg
cttcgggaagtgcagggcctgcatgattatcttttgcatcaatttaataatgacccgaca
ttaaccccgaaagatgtattggttatgtgccctcaggttgaggattatgcaccatatatt
gatgcggtatttgtccgaggctgggaagatatcggagaaaatattccacctttgccttgt
tccatagccgatcgtatcagtaaagacagcgaaccgttggttaatggttttaatgaactg
cttaatttaccagatagtcgttttgaagtttcccgattgattgcctacctgcagttaaag
ccggtacaaaagcgttttaactttaatgatgctgacatcgaattaattagcttttggttg
caacaggccaatatacattggggattagatgcagaacataaaagtcggcaaataggtatt
gaagaggcgagtgaccagtttacctggcagctaggtttaacgcgtttgatccgcggtttt
gcctacagcgatcagctaacgcttgaaggagacaacctctatctaccttgggtagagggt
gacaatagtgagttgttaggtaaatttctacagttcatcgaacagttgcaaatactacac
aaaaacttgcatagctcacgaagcgccgaacaatggcatcagatgctgactgaaatgctt
gatagcctttttgatgaagatgaaaacgatcctgacctagggcttacgattgttcgtaaa
gctattgatgatttccacgaacattgccagcaggccaattatcacgcacccataagcctg
ttgccggttcgggaatatttgaatacgcatttctccgagcccgatccaggccggcagttt
atgatcggccaaataaccttttgttcgatgttaccgatgcgcagtatcccgttcaaactg
gtcgctattctgggcatgaatgatggccagtttccacgccaacgacaaccgattggtttc
gatttaatggcaatgacagcaggacgactcggtgatcgttcgttacataaagacgatcgc
tacctgtttttagaagcgctaatttccgcccgaagtcatttgtatatcagttaccaggga
cgggatataaaaaacaatggcgagaggcagccttctatcgtattacgagaattgatggac
tatcttgaacagggatttggctggcggttctcgccggaacatcaactcaggcagttaccg
atgcagtcttttgctaacgaaaattatagtccggataacgcttgggcaagttttgatggc
aagtggctgaacctggcgccagcaaacgtcaaaactgatacggctagtgatgagccatta
attgaaatagcggcagatcaccaccaggaaaaccaaggcgctaataataggagcagtgat
gagactagtgatgaaatcactgatgaagatttgcttcaggcgcttcggcatccagcaaaa
atcttcggaactcgacaattaaatctgacctttgcttatcaacaagagcctctgtctgat
gttgaacctttcgcgccaagcggattagaaaagtttaactacaagcaacaaattctcggt
actatgttgcaatcggcggatcctaacaatccccaacttgttgatgaaatcactgtgaaa
ctggataacatacaacgccttagcttgttaagcggcgcttttccagataaccatgaaatg
aattcaaccctggaaagctggcgtctaatggtcgaagctttttccgcttatgttgctggt
attattgacgcacaacaggtaaatggcgttgcaattgagttacccttcaaagttgctgta
accacagaagaaaatgagcaacaaattgtttcttgctctgttcctttgctgcagcacccc
aagggttactcgattacctataccaaaagcgctagcgccaatgacgccgatttttgtcga
atatatgtcggccacgtactggcttgtgtttatgctaaaaaccagacaggtatagctaac
cagtcgacagagccaaatgttattacccagggcttttatctcaatgaaaagacgatgaag
gttgaacaaattcaactgacgtattggcaagacgccgaacaaaggttacaggcattgatg
agtggctttcagcaggtattacgaagccctaaaccgataaatatggcaattgctaagaag
catttctggaatcgcaataagtttcagtctggttttatgaatcagcatgacttcgaaaaa
ctctggtatcaggaaaagtatgggcaaagtatggcgacggatccttatctacagtatttc
tttaaaacctgcccgcaactgcaacaaatattgccggatttaatagccttgtatcaggtg
tttttcgagcgcttgtcgattaacaatgtagatttagccgttgagcagcagagcggggct
gatgccgcgtcagagaaggaataa
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