Thalassotalea sp. PS06: FNC98_10485
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Entry
FNC98_10485 CDS
T06100
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03030
DNA replication
thap03430
Mismatch repair
thap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNC98_10485 (dnaE)
03430 Mismatch repair
FNC98_10485 (dnaE)
03440 Homologous recombination
FNC98_10485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thap03032
]
FNC98_10485 (dnaE)
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_10485 (dnaE)
Enzymes [BR:
thap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNC98_10485 (dnaE)
DNA replication proteins [BR:
thap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNC98_10485 (dnaE)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNC98_10485 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDP01724
UniProt:
A0A516HD83
LinkDB
All DBs
Position
complement(2362099..2365584)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAEPKFVHLRVHSDFSMSDGLNKVKPIIAAASEQKMAAIALTDQTNLCGLVKYYGAAHGA
GIKPIIGCDFWVKSEEFEDELFRLVLIAMNNTGYKNLTELISKAYLQGHIQGKAILDKTW
LVEHADGLIILSGGREGDIGKALLKGNQELVDTCLAFYQQHFADRFYLELIRTTREQEEN
YLHMAVALAADRQVPVVATNEVVFLKPEDFDAHEIRVAIHDGFTLEDKRRPKRYSKEQYL
RSEAEMQELFADIPEALANSVEIAKRCNVTVRLGEYFLPDFPTEGMHINDYLIKVSEDGL
QERLEFLFDVNSPDFAEKRKEYDERLKIELDVINNMGFPGYFLIVMEFIQWSKDNNIPVG
PGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERISMPDFDVDFCMDRRDEVIDHVA
DLYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPGDPGMTLAKAFEVEP
RLPEIYQQDTEVKDLIDMCRILEGTTRNAGKHAGGVVISPTVITDFAPLYCDDEGNNPVT
QFDKNDVEEAGLVKFDFLGLRTLTILQWAIEMADEKLLKVGKEPIDIAAIPLDDAKSYDV
LLKAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGRE
EISYPDATWQHEWLQPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFKEGAEKLGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKAHHP
APFMAAVMSADMDNTDKIVTLVDECANMGLDLLPPDVNSGLYKFTVNNDDQIVYGIGAIK
GVGEGPIEAIIEAREQGGPFKDLFDFCARLDLKKINKRVLERLIKAGAMDNLGPHRAAMF
ESLSEAIKAADQHAKAQALGQEDLFGLINVEEEDTRQSFKEVPRWAEDVWLDGERETLGL
YLTGHPIDRYLAEIKHYSTGRLVNLQPAGKDRVQTAVGLVIGVRVLVNKKGRRWALVTLD
DKSARIDVRLFPDDFERYQDILVKDAILVCSGQVSFDDYSGGITMTGREIMSIAQARENY
IKSLDIQLHRTQIGDNFVTDFHRVLEPYKEGTCPVRVFYQRPEASATIELGTQWRVTPSD
ALVHELGLLLGAENVAMAFKE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgaagtttgtacatttaagagtccacagtgacttttcaatgtccgatggt
ttgaataaggttaaacctattattgccgctgccagcgagcagaaaatggcggccatagcc
cttactgatcaaaccaatctatgtggtttggtaaaatactatggtgctgcgcatggggcc
ggaataaagccgatcattggctgtgatttttgggtaaaaagcgaagagttcgaagacgaa
ctattccgactggtgttaatcgcgatgaataataccggctataaaaaccttaccgaatta
atttctaaagcgtatctgcaaggtcatatacagggcaaagcaattcttgataagacctgg
ctcgttgaacatgccgacgggttgattatcctctccggtggtcgagagggggatattggt
aaagccctgttaaaagggaatcaggaactggtagatacctgtctggcattttaccagcaa
cattttgccgatcgtttttatctggaacttatacgcactactcgcgagcaggaagaaaac
tatctgcacatggccgtggcccttgccgctgatcgccaggtgccagtggttgctaccaat
gaagtggtgtttttaaagcctgaagattttgatgcccatgaaattcgggtcgcgattcat
gatggctttaccctcgaagataaacgccgtcctaaacgttattctaaagaacaatacctg
cgctcagaagcggaaatgcaggaattatttgctgatatccctgaggccctggccaatagt
gtcgaaatcgccaaacgctgtaacgtaaccgtgcgtttaggggagtatttcttaccggac
ttcccaacggaaggcatgcacattaatgattacctgatcaaggtatccgaagacggcctg
caggagcgactggaattcctgttcgatgttaattcgccggattttgctgaaaaacgaaaa
gaatatgatgagcgtctgaaaattgaattagacgttatcaacaacatgggcttccctggg
tatttccttatcgttatggaatttatccaatggtccaaagataacaacattccggttggc
cccgggcgtggttctggtgccggttccctggttgcctatgcgttaaaaatcaccgacctg
gatccgctggaatttgacctgctattcgagcgattcctgaacccggaacgtatctcgatg
ccggatttcgacgttgatttctgtatggaccgtcgtgatgaagttatcgatcacgttgcg
gatttgtatgggcgcgacgcggtatcacagattattacttttggtaccatggccgcgaaa
gcggtaatccgcgatgttggccgggtgcttggccacccatacggttttgtcgatagaatt
tccaaattaatccctggcgatccgggcatgaccttggccaaagcctttgaagtggagccg
cgattaccggaaatttaccagcaggacaccgaagttaaagatctgattgatatgtgtcgg
atcttagaaggtaccacccgaaatgccggtaagcatgccggtggtgttgtaatatcgcca
acggtaattaccgatttcgcgcctttgtattgtgatgatgaaggtaataacccggtaacc
cagtttgacaagaacgacgttgaagaagcaggactggttaaattcgacttcttgggtctt
agaactctgaccattttgcaatgggccattgaaatggccgatgagaaattattgaaggtc
ggcaaagaaccgatagatattgccgctatcccccttgatgacgcgaaaagctatgatgtg
ttgttaaaggcggaaaccaccgcggtattccagcttgaatcccgtggtatgaaggatttg
attaagcgattaaaacccgattgctttgaggatatgatcgctctggtagccctgttccga
ccggggccattgcaatcaggcatggtagataactttatcgaccgtaagctcggacgagag
gaaatatcgtatccagatgccacctggcagcatgagtggctacaaccgattctagaacca
acctacggcattatcctgtatcaggagcaggtaatgcagattgcccaggtccttgctggt
tatacccttggtggcgctgacatgctgcgtcgagccatgggtaagaaaaagccagaagag
atggccaaacagcgtggtggttttaaagaaggtgcggaaaagcttggtgtagacggcgag
ctggcgatgaaaattttcgatctggtagagaaatttgccggttacgggtttaacaaatcg
cactccgcagcttacgcattagtttcttatcaaacgctgtggatgaaagcacatcatccg
gcgccatttatggcggcagtaatgtcagccgatatggataacaccgataaaatcgtaacc
ctggtggatgaatgcgccaatatggggctcgatttgctgccgccggatgttaattctggt
ttgtacaaatttaccgtcaataatgatgatcaaattgtttatggtatcggcgccataaaa
ggcgtgggcgaaggcccgattgaagcgattatcgaagcccgggagcagggtgggccattt
aaggatctatttgatttctgtgcccgtctcgatttgaaaaaaatcaacaaacgtgtgctt
gaacgtcttattaaagccggcgctatggataaccttgggccacatcgagcggccatgttt
gaaagccttagcgaagcaattaaagccgctgaccagcatgcaaaagcgcaggctttgggt
caggaagatttattcggacttatcaatgttgaagaggaagatacccgtcagtcgtttaaa
gaagtgccacgttgggccgaagatgtctggcttgatggcgagcgggaaacccttggttta
tatctgaccggacatccgattgaccgatatctggcagaaattaagcactacagcactggc
cgtttggtaaatctgcaaccagcaggtaaagatcgagttcagactgctgtaggactggta
atcggagtcagggtgttagtgaataaaaagggccgtcgctgggctctggttacccttgat
gataaaagtgcacgtatcgatgttcgtctgtttcctgacgattttgagcgttatcaggat
atcctggtaaaagatgctattttagtctgtagtggacaggtcagctttgatgattactcc
ggtggtattacaatgaccggtcgagagatcatgagtattgcccaagcgcgagaaaattat
ataaaatctcttgatatacaattgcatcgcacccaaatcggcgataactttgttaccgat
tttcatcgggtactggaaccctataaagaagggacctgcccggttcgagtgttttatcag
cgaccagaagccagcgcgactattgaattaggaacgcaatggcgggtaacccccagcgat
gctttagtacacgaattaggattattactgggcgcggaaaacgtcgccatggcatttaaa
gaataa
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