Thalassotalea sp. PS06: FNC98_10605
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Entry
FNC98_10605 CDS
T06100
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FNC98_10605 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thap02000
]
FNC98_10605 (msbA)
Enzymes [BR:
thap01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FNC98_10605 (msbA)
Transporters [BR:
thap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FNC98_10605 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
AAA_22
AAA_29
AAA_21
AAA_16
DEAD
AAA_15
DUF2207_C
Herpes_UL43
RsgA_GTPase
ABC_ATPase
MMR_HSR1
AAA_25
DUF87
APS_kinase
AAA_5
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QDP01745
UniProt:
A0A516HDA1
LinkDB
All DBs
Position
complement(2388041..2389810)
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AA seq
589 aa
AA seq
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MQATKSLEGKATEKSRTWPNFRRLFTYTRGLRAGLLVSIIGMLGYAGIDTLFFSQLKPLI
DEGLTQSNPNILKYAPVFVLVAFLFRGIFHFIGTYCLAWVGNHVVMKLRQELFEHILAMP
VSFHDKESTGALISKLTYDTEQVLNTTSKAVLTLVREGAFVLGLLGLMFYYSWQLSSIFL
LITPVISVIVVVVSKRFRAVSKHIQQAMGEVTGAAEQSFNGHKVVVTFDGQTRENERFAK
INNQNRLQRMKMVAAKAISVPVIQIIASFALAFVLYIASMDNMIENLTPGIFTTVVTSMI
MLLRPLKLLTTVNSEFQKGMAACTSIFDVLDQPIESDTGTLDLKRSRGDIEFKQVNFAYE
GTETNALDNVSFNVPPGTTTALVGRSGSGKSTISSLLLRFYNAKSGEVLIDGENIEDYRL
KPLRKQFAYVSQQVVLFNDTLANNIAYGRPQASEQEIIEAAKHAHVLEFAEDLPDGLQTV
IGENGSMLSGGQRQRVAIARALLCDAPILILDEATSALDTESERHIQDALKFLQQNRTCI
VIAHRLSTIENADNILVMEKGKLIEQGDHQQLLAKEGAYAQLHKFQFGE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctacaaagtcgttagaaggaaaagccacagagaagagtcgtacctggcccaat
ttccgtcgtttatttacctacacccgtggcctgagagcggggttgctggtttctattatt
ggtatgcttggttatgcgggcatcgacaccctgtttttttcccagctaaagccgcttatt
gatgagggcttaacgcaatccaatccaaatattttaaaatatgcgccagtctttgtgctg
gtggcatttctgtttcgcggtatttttcactttattggtacctactgcctggcctgggtc
gggaatcatgtggtaatgaaactgcgtcaggagttatttgaacatatcctggcaatgccg
gtttcgtttcacgataaagagtcaacgggtgcccttatttcgaaattaacctacgacacc
gagcaggtattaaataccacctcaaaggcggtactcaccctggttcgggaaggcgccttt
gtcctcggattacttggtttaatgttttattactcctggcagttatcatcaattttcctg
ctgatcacgccggtgatttcggtgatcgttgtggttgtttcgaaacgattccgggcggtg
agtaaacacattcagcaagcgatgggggaagtcaccggcgctgcagaacaaagtttcaat
ggtcataaggttgtcgtaaccttcgatggccagactcgagaaaatgaacgcttcgcaaaa
atcaataatcaaaatcgattgcaaagaatgaaaatggtagcagccaaagctatcagtgtg
ccggtgatccagattattgcctcatttgcactggcattcgttttatacatcgccagtatg
gacaatatgatagaaaacctgacaccgggtatttttaccaccgtggtaacgtcaatgatc
atgttactgagacctttgaagctacttaccacggttaatagtgagtttcaaaaaggcatg
gctgcctgtaccagtattttcgatgttttggatcaaccgatagaatcagataccggaacg
ttagacctgaaacgcagccgcggcgatatcgagtttaagcaggttaactttgcttatgaa
ggcactgaaaccaatgcgttagataacgtcagctttaatgttccgccgggaaccacaacc
gcgctggttggccgttctggttctggaaagtcgacgattagctccttgctgttacgtttt
tataatgccaaatctggcgaagtattaatcgatggcgaaaatatcgaagattatcgatta
aaaccactgcgtaagcaatttgcttatgtttcgcagcaggttgtgctttttaacgatacg
ttagcgaacaatattgcttatggtcgtccccaagccagtgaacaggaaattatcgaagcg
gctaagcatgcccatgtgcttgagttcgcagaagacttacctgatggtttgcaaacggtt
atcggggagaatggttcaatgctaagtggtggccagcgccagcgcgtggccattgccaga
gcgttattgtgtgacgcgccaattttgatacttgatgaggctaccagtgcgctggatacg
gaatctgaacgtcatatccaggatgcattgaaatttctacagcaaaatcgtacctgtatc
gtcattgctcacagattatccaccatagaaaatgccgacaacatcttagttatggaaaaa
ggcaaattaattgagcagggcgatcatcagcagctattggccaaagaaggcgcatatgca
cagctgcataagtttcagtttggtgagtaa
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