Thalassotalea sp. PS06: FNC98_12415
Help
Entry
FNC98_12415 CDS
T06100
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
thap
Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thap01002
]
FNC98_12415
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thap01011
]
FNC98_12415
Peptidases and inhibitors [BR:
thap01002
]
Cysteine peptidases
Family C82
FNC98_12415
Peptidoglycan biosynthesis and degradation proteins [BR:
thap01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FNC98_12415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QDP02071
UniProt:
A0A516HE75
LinkDB
All DBs
Position
complement(2800646..2802337)
Genome browser
AA seq
563 aa
AA seq
DB search
MQNMIKTQGTKAYLKLAARFKLAIHLYLASALLLSLSAIAGAPLSGIHSGYSPSFSSPTI
LQLNDIALPAGSSFYLHDSGIISRSHYQLILQKTGRSALWFESQGLSSSGKYLYRLLDDL
GWLQEKSWQNASDTYQRDILLTQGTYFLLQSTQVNNNSGNGHELPTSTLISAFNKQQEQE
LLYRMLPRQSQFWRLRGQLQEFRKLAALSWPTLDHSFTPELGQAHPEVRKLRFILEKYQD
LDVKYQTPTRQDVFDSVAIEALKRFQLRHGLKADGKLGPNSHMALAIAPQQRVTQLQINL
MRWLQLPRSFRGNEILVNIPSYQLRLLNNGRTQKTMRVIVGNKENPTPVITSAVNRLTVN
PTWTPTPKIIKDDLLEEYQRDFRYLQRKDFQLVRGYWRNKEIRQIDSPDYDLLNLPDNFR
LVQSAGRSNPLGRYRFNMPNGYAIFLHDTPAKWHFSKPYRALSHGCIRLEEPRFLANELL
KQLPEQNKHKQTMQSALQEKHTQMLFLEEPVPVYITYHTAWIDEQGVINFNRDIYGWDNK
ANLIAQFKTIISNPVITLSLNNL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatgataaaaactcagggaaccaaggcgtatctaaaactagccgctaggttt
aagctggctattcacctttacctggcaagcgcattgttgctgtcattatcggctattgcg
ggtgcgccactgtctggtattcactcgggctatagtccctcattttcgtcgcccaccata
ttacaactaaatgatattgcattacctgcaggcagttcattttatcttcatgatagtggc
atcatctcccgttctcattatcaactaatcctgcaaaaaactggccgtagtgccttatgg
tttgagtctcaggggctgagttcgtcaggaaagtacttgtatcgattgctcgatgatttg
gggtggcttcaggaaaagtcctggcaaaacgcctctgacacctatcagcgggatattctg
ctcacccaaggtacgtattttctgttgcagtctacccaggtaaacaataactcgggcaat
ggtcatgagcttccaaccagcaccttgatatcagcttttaacaagcagcaggagcaggaa
cttctctatcgaatgctacccagacaatcgcagttttggcgactacgagggcaattgcag
gaatttcgcaaacttgctgctctttcctggccaacgttggaccattcatttaccccagaa
ctgggccaggcacacccagaggtcagaaaacttaggtttattctggaaaaatatcaggat
ctcgacgttaagtatcaaaccccaaccaggcaagatgtttttgattcagttgccattgag
gcgttaaaacggtttcagttacgtcatggcctgaaggccgatggcaagctgggaccgaat
agccatatggctttggcaattgctccgcaacagcgggttacacaacttcagatcaatctg
atgcgttggttgcagctaccgcgaagttttcgtggtaacgagattctggttaacataccc
agttatcaattacggcttttaaataatggcagaacccagaaaaccatgcgggttatagtc
ggtaacaaagaaaatcccaccccagtgataaccagcgcggtgaaccgcctgacggtaaac
ccaacctggaccccaacgccgaaaattatcaaagatgatttacttgaagaatatcagcgt
gattttcgttatttgcaacgcaaagactttcaattggtgcgcggctattggcgcaacaaa
gagattcgtcaaatcgattcccccgattatgacttgcttaatctgcccgataattttcgc
ttggtgcaatctgccgggcgctcaaatcccctcggccgttatcgatttaacatgccaaat
ggctacgccatttttcttcatgatacgccagcgaaatggcactttagtaaaccttatcgg
gcgctgagtcacggttgcattcgcttagaggaaccaagatttcttgccaacgagctgctc
aaacaattgccggaacagaacaaacataaacaaaccatgcaaagtgcgcttcaagaaaaa
cacacacaaatgttgtttttagaggagcctgtacctgtctacattacctatcacaccgcc
tggattgatgaacagggggtgattaactttaaccgtgatatttatggttgggataataag
gcaaacctcatcgcgcaatttaagaccataattagcaatccagtgataaccctttccttg
aataacctctaa
DBGET
integrated database retrieval system
