Thalassotalea sp. PS06: FNC98_12805
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Entry
FNC98_12805 CDS
T06100
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thap
Thalassotalea sp. PS06
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_12805 (phrB)
Enzymes [BR:
thap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FNC98_12805 (phrB)
DNA repair and recombination proteins [BR:
thap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FNC98_12805 (phrB)
Prokaryotic type
FNC98_12805 (phrB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDP02141
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All DBs
Position
complement(2901423..2902844)
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AA seq
473 aa
AA seq
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MMYWIRNDLRVHDNPALIQALQQGCTEAVFLSCEKQWQQHHQSPVKTDFIYRHLQLLSKQ
LADLGVRFRIIEVDDFQGQAHWLKAWQDGQHSKGLTAQVFANAELELNERLRDKQIIDSG
VSLNLFEADVIISKGLVLTAGGDMYRVFTPFKRAWITHLLNNGFECLPKPNPIKGEAPNV
NNNDVIDSIEQRRKSINKSSEHWPDASEVLSGPLREWLDNGIHDYGNARDFPAKPATSRL
SPHLCIGAISPRLLIRLLMQSYPMILEHQQSSTFVWLNELIWREFYRHLLHAYPNLIKGE
NFNRQYDTLQWRNDPQEFARWCQGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDL
LIDWRWGEQYFMEQLIDGDFAANNGGWQWAASTGCDAQPYFRIFNPVRQSQNFDPNGEFI
RKYVPELAQIPDRDIHFPHQYLTDNNCENLYESAIVDHKQAREVTLAAYKACR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattggattcgaaatgacttgcgagtgcatgacaacccagcactgatacaagca
ttacagcagggatgcacagaagcggtttttctcagttgcgaaaaacagtggcaacaacat
catcaaagcccggttaaaaccgacttcatataccgacacttacaacttcttagtaaacag
ttagcggaccttggagtccgctttcgcattattgaagtcgacgattttcaaggtcaggca
cattggcttaaagcatggcaagacgggcaacacagtaaaggattaaccgcccaggttttt
gctaatgcagaacttgaactcaatgaaaggctgcgtgataaacaaattatcgatagtggc
gtaagcctcaacctttttgaagccgatgtgattatctcgaaagggctggtgttaaccgct
ggcggcgatatgtatcgggtatttaccccgtttaaacgggcttggataactcacctgctc
aataacggctttgagtgtcttccgaaaccgaacccaataaagggggaggcccccaacgta
aacaacaacgacgtcattgatagtatcgagcaacgtcggaaatctatcaataaatcgtca
gagcactggcccgatgctagcgaagttttatctgggccgttaagggagtggcttgataat
ggtatccacgactatggaaacgccagagattttccggcaaaacccgcgacctcgaggctt
tcacctcatctatgtattggtgccatcagtcctcgcttgctgattcgtttgctgatgcaa
tcgtacccgatgatattggagcaccagcagtcatcaacgtttgtctggttaaacgaattg
atctggagagagttttatcggcacttgctccatgcttatccgaatttaatcaaaggtgaa
aactttaatcgtcaatatgacacattacagtggcgaaacgatccgcaagagtttgctcgt
tggtgtcagggaaaaaccggttatccaatcgttgatgcggcgatgcggcaattaaatcag
accggctggatgcataatcgcttgcgaatgatagtggccagttttctcactaaggattta
ctcatcgactggcgctggggcgagcaatattttatggagcagctaatcgatggagatttt
gctgcaaataatggtggctggcagtgggcggcgtccacgggttgtgatgcgcagccgtat
tttcgtatatttaatccggtcaggcaaagccaaaactttgatcctaatggagaatttatt
cgtaaatatgtaccagagctggcgcagatccctgatcgtgatattcactttccacatcag
tatcttactgataataattgtgaaaatctgtacgaatcagctatcgtagatcataagcaa
gccagagaagttactttagccgcgtacaaagcgtgccgctag
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