Thalassotalea sp. PS06: FNC98_13360
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Entry
FNC98_13360 CDS
T06100
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNC98_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_13360
Enzymes [BR:
thap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FNC98_13360
DNA repair and recombination proteins [BR:
thap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNC98_13360
Prokaryotic type
FNC98_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
T2SS_GspM_XcpZ
Motif
Other DBs
NCBI-ProteinID:
QDP03023
LinkDB
All DBs
Position
complement(3040810..3041511)
Genome browser
AA seq
233 aa
AA seq
DB search
MPQGTWQDFFASQTSLPYFKNISETVRSERDAGQVIYPEDVNVFRAFELTPLDMVKVVVL
GQDPYHGPQQAHGLAFSVSKGVKIPPSLRNMFKELEQDIAGFSAPDSGDLTAWAEQGVLL
LNTVLTVRQGNAHSHSKLGWEDFTEQVMAELNRQQRPMVYLLWGSHAQNKGKVIDNPQHK
ILTSAHPSPLSAYRGFFGCRHFSKANEFLQKKGLQEIDWSLQSSDPRDQQTLF
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
attccgcaaggtacctggcaggacttttttgcatcgcaaaccagcctgccttacttcaag
aacattagcgaaactgtaaggtctgagcgtgatgctggtcaggttatctaccctgaagat
gttaacgtattcagagcatttgaactcacacctttagatatggttaaggttgtggtgtta
ggccaggacccctaccatggcccgcaacaagcccatggtctggcgttttccgtatccaaa
ggcgtgaaaattccaccatcacttcgaaatatgtttaaagagctggaacaggatattgcc
ggtttttcagcacctgattccggagatttaaccgcctgggcagagcagggtgtgttgcta
ctcaatacggttttgacggttcgccagggtaatgcccactcccacagtaaactcggttgg
gaggacttcaccgaacaggttatggccgagttgaatcgtcagcagcggccaatggtttat
ttactttgggggagccatgctcagaataagggtaaggttatcgataacccgcagcataag
attttaacctcagcccatccttcaccattatccgcttaccggggtttttttggatgccgg
catttttccaaagccaatgagttcttgcagaaaaaaggtttgcaggaaattgactggtcg
ctgcaatcgagcgatccaagggatcagcagacactgttttaa
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