Thalassotalea sp. PS06: FNC98_14620
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Entry
FNC98_14620 CDS
T06100
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNC98_14620 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thap03021
]
FNC98_14620 (rpoA)
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_14620 (rpoA)
Enzymes [BR:
thap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNC98_14620 (rpoA)
Transcription machinery [BR:
thap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNC98_14620 (rpoA)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNC98_14620 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QDP02471
UniProt:
A0A516HFD8
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All DBs
Position
complement(3317040..3318029)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPKLVGIENVSTTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAVGLEGKTEAVLTLTKSGQGPVLAADIQHDGD
VTIANPEHVICHLTGDGEVSMRIKVEMGRGYVPASARRNAEEEDRAIGRLLVDASFSPVE
RIAYDVDSARVEQRTDLDKLVIDMETNGTLDPEEAIRRASTILAEQLDAFVDLRDVKEEE
VKEEKPAFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattccttaagccgaaactagtgggcatcgagaacgttagc
accactcgcgctaaggtaactttagagccacttgaacgtggttttggtcacactttaggt
aatgcgttacgccgcatcttactttcgtcaatgccaggatgcgcagtgactgaagttgaa
atagacggtgttttgcacgaatacagcagtaaagaaggtgtccaagaggacatcatcgaa
atcttgttgaaccttaaaggtctggctgttggtttagaaggcaaaactgaagcagtttta
actttaactaagtcaggccagggccctgtactggctgctgatattcagcatgatggtgat
gtaactatcgccaaccctgagcatgttatctgtcatttgacaggtgacggcgaagtcagt
atgcgcatcaaggtagaaatgggtcgtggttatgtacctgcttctgctcgtcgcaatgcc
gaagaagaagaccgtgcaattggccgcttgctagttgacgcttcattcagtcctgttgaa
agaattgcttatgatgttgactcggctcgtgttgagcaacgtacagacttagataagcta
gttatcgatatggaaactaacggtacgctagatccagaagaagcgattcgtcgtgcttct
accatcttagctgaacagctagatgcgtttgttgatctacgtgacgttaaagaagaagaa
gttaaagaagagaaaccagctttcgatcctatccttcttcgtccagtagatgatttagaa
ctaactgtacgttcagccaactgtttgaaagcagaagcgattcagtacattggtgattta
gtacagcgtgcagaagtcgaacttcttaaaacacctaacttaggtaagaagtctctgact
gaaatcaaagacgtgttagcgtctcgtggtttgtctctaggtatgcgccttgagaactgg
ccaccagaaagcatcgctgataacgactaa
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