Thalassotalea sp. PS06: FNC98_15155
Help
Entry
FNC98_15155 CDS
T06100
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNC98_15155 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thap03019
]
FNC98_15155 (recQ)
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_15155 (recQ)
Enzymes [BR:
thap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNC98_15155 (recQ)
Messenger RNA biogenesis [BR:
thap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNC98_15155 (recQ)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FNC98_15155 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF7123
Motif
Other DBs
NCBI-ProteinID:
QDP03046
LinkDB
All DBs
Position
complement(3420597..3422387)
Genome browser
AA seq
596 aa
AA seq
DB search
MQQAPDLLHSLKHHFGYEQFRSGQKQVIEQLMEQRDCLVLMPTGGGKSLCYQLPATLMPG
LTVVVSPLIALMKDQVDGLLRQGISAAYVNGTMDTADINQTMQRVGRGEVRILYVAPERL
LSHYFLQSLTQMQISFFAIDEAHCISQWGHDFRPSYTQLGRLKEYFPYTPIMALTATADV
TTRKDILQQLNLQNPFVLLDSFDRPNIRYTLTEKYNGQRQLLDYLRDNSEDSGIIYCNSR
WQVDKLTKELAEKGVNCAAYHAGMDADIRNVVQDGFTKDNIRIVIATIAFGLGINKPNIR
FVVHYELPRSLESYYQETGRAGRDGLEAEALLLYDHQDIDRIKKRINDSDNEQRAAVELQ
RFSAMAGFAEAQTCRRQVLLNYFAEYTHAGCGNCDICLDPPSRYEATVDAQKVLSCVYRI
NQVGDIHYVIDVLRGRDTDKLKKAGHTAVSTFGIGQDKTRGYWFSVIRQLIHLGLLQQDI
EQQSALQLTEASRPILSAKEPLMLARPRLQHASYWQQNKPKNQYDKGLFRKLRELRKVLA
DQEDIAPFIVFNDASLMEMARLKPTNSNEFLSISGVGDTKLHRYGKAFMDLIKEFE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
attcagcaagccccggatttactgcactcattgaaacatcattttggttatgagcaattt
cgctcgggccaaaaacaggtgattgagcaactgatggaacaacgggattgtctggtgtta
atgcctaccggcggtggtaaatcattatgttatcaactgccggcaaccttgatgccgggg
ctaaccgtggtcgtttccccgttaatcgcattgatgaaagaccaggtagatggtttattg
cgtcagggcatcagcgccgcttatgtgaatggcactatggataccgcggatattaatcag
accatgcaaagggtaggacggggtgaagttcggattctttatgtggctccggagcgtttg
ttatcgcactattttctgcaaagtctgacgcaaatgcagatcagttttttcgccatcgat
gaagctcactgtatttcccagtggggacatgattttcgaccctcttatacgcaattaggt
cgcctgaaagagtactttccctatacgccaattatggcactaacggctaccgcggatgtg
accacccgaaaagacatattgcagcaactgaacctacaaaatccgtttgtattattggat
agttttgaccgacccaatattcgttataccttaacggaaaagtacaatggccaacggcaa
ttgctggattatcttcgagacaacagtgaagacagtggcattatttactgtaactctcgc
tggcaggtggacaaactcaccaaagaattggcagaaaaaggtgtcaattgtgccgcatac
catgctggtatggacgccgatatccgtaatgtcgttcaggatgggtttaccaaagacaat
atccgtattgtgattgccaccattgcctttggtcttggtattaacaaaccgaatatacgg
tttgtggtgcactatgagttgcctcgctcgctcgaatcctattatcaggaaaccggccgg
gcgggtcgtgatggattagaagcggaagcgttgcttttatatgatcatcaggatatagat
cgtattaaaaagcgtataaatgatagtgataatgagcagcgagcggcggttgagttacag
cgctttagtgccatggcaggttttgccgaagcgcagacctgtcggcgtcaggtactatta
aactattttgccgagtatactcatgctggatgcggaaactgtgatatctgcctggacccg
ccaagccgttatgaagcgacagttgatgctcagaaagttttatcctgtgtttatcgaatc
aaccaggttggtgatatccactatgtcatcgatgtgctgcgcggccgcgataccgataaa
ctgaaaaaagccgggcatacggcggtcagtacctttggtattggtcaggataaaacccgc
ggctattggttttcggtaatccgccaactcattcatcttggattattacagcaggacatt
gagcaacaatcggcattgcagttaaccgaagcttcacggcccattcttagtgccaaagaa
cccttgatgctggcgcgaccacgattacaacatgccagttactggcaacaaaataaaccg
aaaaatcaatatgataaagggctgtttcgaaaacttcgagagcttcgtaaagtgctcgcc
gatcaagaggatatcgccccatttatcgtctttaacgatgcatcactgatggaaatggca
cggttaaagcccaccaacagcaatgagtttttaagtatctctggcgtcggtgatactaag
ctacaccgctatggcaaagcattcatggatcttattaaagagtttgaatag
DBGET
integrated database retrieval system
