Thalassotalea sp. PS06: FNC98_15185
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Entry
FNC98_15185 CDS
T06100
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thap
Thalassotalea sp. PS06
Pathway
thap03420
Nucleotide excision repair
thap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FNC98_15185 (uvrD)
03430 Mismatch repair
FNC98_15185 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thap03400
]
FNC98_15185 (uvrD)
Enzymes [BR:
thap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNC98_15185 (uvrD)
DNA repair and recombination proteins [BR:
thap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNC98_15185 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FNC98_15185 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF4391
AAA_22
DUF3553
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QDP03048
UniProt:
A0A516HH30
LinkDB
All DBs
Position
complement(3428828..3431002)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSELLDSLNDKQREAVAAPAQNMLVLAGAGSGKTRVLVHRIAWLMRVENVSPHSILAV
TFTNKAAAEMRARVEQAVGSNIHGMWIGTFHGLAHRLLRMHFQEAKLPQSFQVLDSDDQL
RLLKRVIRSMQLDEKKWPAKQAMWYINGKKDEGLRPKHIDAQYDPTEETFKKIYQIYQDT
CDRAGLVDFAELLLRAHELWLNNPVLLEHYQRRFSRILVDEFQDTNAIQYAWLNLLGREH
GNVMIVGDDDQSIYGWRGAKIENIQRFLRDFDGAETIRLEQNYRSTGNILNAANALISNN
NNRLGKDLWTKDSDGEAISVYTAFNDLDESRFVSSRIKQWLDEGNSLDDVAILYRSNAQS
RLLEEALLQAQLPYRIYGGLRFFERQEIKDALAYMRLMNNRNDDASFERIINTPARGIGN
QTLSLVRDAARSHGSTLWEACIRMIEGEQLSARPAKSIKAFIDLVDQLEDDTLNLNLDQQ
ANHVIQHSGLKAMYQAEKGERAAARIENLNELVTACQTFEVDPEVEDEMTPLTAFLTHAS
LEAGESQADEYEAAVQLMTLHSAKGLEFPLVFMVGMEEGMFPSQQSGDDISRLEEERRLC
YVGMTRAMEKLYLCHAESRRLYGQEKYHRPSRFLREIPDQYLEEIRMKNQAAKPKTTGRF
SNTISLETFADSGFKLGQQVRHAKFGDGVVLNFEGSGAQGRVQVNFADHGSKWLMVEFAN
LEAI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctgaattactcgattcgttaaatgataaacaacgggaagcagtagcggcc
ccggcacagaatatgttggttctggctggcgctggtagtggtaaaacccgggttctggtg
catcgaattgcctggttaatgcgagtcgagaatgtctctccccatagtattttggcggta
acttttaccaacaaagcagcggcggaaatgcgtgccagggttgagcaagcggtgggtagt
aatattcatggtatgtggataggtaccttccatggtcttgcccatcgattattgcgcatg
cattttcaggaagccaagttgccgcaaagttttcaggtgctcgattccgatgaccagctg
cgtctgttaaaacgggtgattcgttcaatgcagctggatgagaagaaatggccagcaaag
caggcgatgtggtacatcaatggcaaaaaggatgaaggcctacgtcctaaacatatcgat
gctcaatacgatcctaccgaagaaacttttaaaaagatttatcaaatttatcaggacacc
tgtgaccgcgcaggcctggtagattttgctgagctgttattgcgtgcccatgaattatgg
ctcaacaatccagtgcttcttgagcactatcaacgccggttctcacgcattttggtggac
gaatttcaggataccaatgccattcaatatgcctggttaaacttgctgggtcgcgagcac
ggtaatgtgatgattgttggcgatgatgatcagtccatttacggctggcgtggtgccaag
attgaaaatattcagcgttttttacgagattttgatggcgctgaaaccattcgtcttgag
caaaattatcgttctactggcaatatacttaatgctgccaatgctttgattagcaataac
aataatcgccttggtaaagatctctggacaaaagattcagacggtgaagcaatctctgtt
tataccgcctttaatgatttggatgagtcacgctttgtcagtagccgtatcaaacaatgg
ctggacgaaggtaatagtctcgatgatgtggctatcttgtatcgctctaatgcccagtca
cgtttgctcgaggaagcgttactgcaggcgcagttgccctatcgcatctatggtggttta
cgattcttcgaacgtcaggaaattaaagacgcgttggcatatatgcgattgatgaataat
cgtaatgatgatgcgtcatttgagcgaattattaataccccagcccgaggcataggtaac
caaaccctttcgttagttcgggatgccgccagaagccatggctcgactttatgggaagcc
tgtattcgcatgatcgaaggcgagcaactttcagctcgtccggccaaatcgattaaagcg
tttatcgatttagtcgatcagttagaagatgacactttaaacctcaacctcgaccagcaa
gccaatcatgtgattcaacactcaggtttgaaagccatgtatcaagcggaaaaaggtgaa
cgcgctgcggctcgaattgagaacttaaatgaattggtaaccgcatgtcagacgtttgaa
gtagatccggaagtggaagatgaaatgacgccactgacggcatttctaactcatgcatca
ttggaagcgggtgaatctcaggctgatgaatatgaagcagcagtgcagttaatgaccttg
cattccgccaaaggtctggagttccctctggtatttatggtgggtatggaagaaggcatg
ttcccatcacaacaatccggtgatgatatctcgcgattggaagaagaacgtcgcctttgt
tatgtggggatgacccgtgccatggaaaaactgtatttgtgtcacgccgaatcccgtcgt
ttatacggacaggaaaaataccatcgtccgagtcgattcctacgggaaattccagaccag
tacctggaagaaatccggatgaaaaatcaggccgcaaagccgaaaaccacaggtcgattc
tcgaatacgatttctctggaaacctttgctgattccgggtttaaactcgggcagcaggtt
cgtcatgcgaaatttggcgacggtgtagtgctgaactttgaaggtagtggagcgcaaggt
cgcgtgcaggttaatttcgctgaccacggcagcaagtggttgatggtggagtttgcgaat
ttggaagcaatttag
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integrated database retrieval system
